Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SCN11AQ9UI33 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCN11AQ9UI33 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.74■■■□□ 2.51
SCN11AQ9UI33 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCN11AQ9UI33 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
SCN11AQ9UI33 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.73■■■□□ 2.51
SCN11AQ9UI33 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SCN11AQ9UI33 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SCN11AQ9UI33 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.73■■■□□ 2.51
SCN11AQ9UI33 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.73■■■□□ 2.51
SCN11AQ9UI33 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.73■■■□□ 2.51
SCN11AQ9UI33 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.73■■■□□ 2.51
SCN11AQ9UI33 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SCN11AQ9UI33 AC097639.1-201ENST00000565519 1891 ntBASIC30.72■■■□□ 2.51
SCN11AQ9UI33 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.72■■■□□ 2.51
SCN11AQ9UI33 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SCN11AQ9UI33 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SCN11AQ9UI33 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.72■■■□□ 2.51
SCN11AQ9UI33 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SCN11AQ9UI33 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SCN11AQ9UI33 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.71■■■□□ 2.51
SCN11AQ9UI33 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
SCN11AQ9UI33 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCN11AQ9UI33 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.71■■■□□ 2.51
SCN11AQ9UI33 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SCN11AQ9UI33 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
SCN11AQ9UI33 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCN11AQ9UI33 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SCN11AQ9UI33 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCN11AQ9UI33 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
SCN11AQ9UI33 AC110285.6-201ENST00000617652 491 ntBASIC30.69■■■□□ 2.5
SCN11AQ9UI33 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.69■■■□□ 2.5
SCN11AQ9UI33 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCN11AQ9UI33 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCN11AQ9UI33 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SCN11AQ9UI33 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SCN11AQ9UI33 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.68■■■□□ 2.5
SCN11AQ9UI33 AL136116.3-201ENST00000402907 1138 ntBASIC30.68■■■□□ 2.5
SCN11AQ9UI33 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.68■■■□□ 2.5
SCN11AQ9UI33 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.68■■■□□ 2.5
SCN11AQ9UI33 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCN11AQ9UI33 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCN11AQ9UI33 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SCN11AQ9UI33 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.67■■■□□ 2.5
SCN11AQ9UI33 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.67■■■□□ 2.5
SCN11AQ9UI33 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.67■■■□□ 2.5
SCN11AQ9UI33 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.67■■■□□ 2.5
SCN11AQ9UI33 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
SCN11AQ9UI33 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.66■■■□□ 2.5
SCN11AQ9UI33 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.66■■■□□ 2.5
SCN11AQ9UI33 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCN11AQ9UI33 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.66■■■□□ 2.5
SCN11AQ9UI33 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCN11AQ9UI33 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.66■■■□□ 2.5
SCN11AQ9UI33 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.66■■■□□ 2.5
SCN11AQ9UI33 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCN11AQ9UI33 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCN11AQ9UI33 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.65■■■□□ 2.5
SCN11AQ9UI33 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SCN11AQ9UI33 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.64■■■□□ 2.5
SCN11AQ9UI33 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SCN11AQ9UI33 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
SCN11AQ9UI33 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.64■■■□□ 2.49
SCN11AQ9UI33 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.64■■■□□ 2.49
SCN11AQ9UI33 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.64■■■□□ 2.49
SCN11AQ9UI33 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SCN11AQ9UI33 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCN11AQ9UI33 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.63■■■□□ 2.49
SCN11AQ9UI33 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.63■■■□□ 2.49
SCN11AQ9UI33 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
SCN11AQ9UI33 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
SCN11AQ9UI33 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCN11AQ9UI33 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SCN11AQ9UI33 AC090877.2-201ENST00000558441 1738 ntBASIC30.61■■■□□ 2.49
SCN11AQ9UI33 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCN11AQ9UI33 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCN11AQ9UI33 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SCN11AQ9UI33 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCN11AQ9UI33 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
SCN11AQ9UI33 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.6■■■□□ 2.49
SCN11AQ9UI33 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCN11AQ9UI33 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SCN11AQ9UI33 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
SCN11AQ9UI33 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SCN11AQ9UI33 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.59■■■□□ 2.49
SCN11AQ9UI33 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SCN11AQ9UI33 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCN11AQ9UI33 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SCN11AQ9UI33 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.58■■■□□ 2.49
SCN11AQ9UI33 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.58■■■□□ 2.49
SCN11AQ9UI33 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.58■■■□□ 2.49
SCN11AQ9UI33 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.58■■■□□ 2.49
SCN11AQ9UI33 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.57■■■□□ 2.48
SCN11AQ9UI33 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
SCN11AQ9UI33 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.56■■■□□ 2.48
SCN11AQ9UI33 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.56■■■□□ 2.48
SCN11AQ9UI33 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.56■■■□□ 2.48
SCN11AQ9UI33 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.56■■■□□ 2.48
SCN11AQ9UI33 AC092803.2-201ENST00000564287 1899 ntBASIC30.56■■■□□ 2.48
SCN11AQ9UI33 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 385.8 ms