Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.5■■□□□ 1.51
RNF38Q9H0F5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.5■■□□□ 1.51
RNF38Q9H0F5 AC092028.1-203ENST00000608262 953 ntBASIC24.5■■□□□ 1.51
RNF38Q9H0F5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF38Q9H0F5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
RNF38Q9H0F5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.5■■□□□ 1.51
RNF38Q9H0F5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF38Q9H0F5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 TSPY9P-201ENST00000440215 945 ntBASIC24.49■■□□□ 1.51
RNF38Q9H0F5 TSPY11P-201ENST00000442607 1045 ntBASIC24.49■■□□□ 1.51
RNF38Q9H0F5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF38Q9H0F5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RNF38Q9H0F5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RNF38Q9H0F5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF38Q9H0F5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.48■■□□□ 1.51
RNF38Q9H0F5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.48■■□□□ 1.51
RNF38Q9H0F5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF38Q9H0F5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RNF38Q9H0F5 AF131216.4-201ENST00000638924 1588 ntBASIC24.46■■□□□ 1.51
RNF38Q9H0F5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF38Q9H0F5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF38Q9H0F5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF38Q9H0F5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.46■■□□□ 1.51
RNF38Q9H0F5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF38Q9H0F5 AC091060.1-201ENST00000623524 1766 ntBASIC24.46■■□□□ 1.51
RNF38Q9H0F5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF38Q9H0F5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF38Q9H0F5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF38Q9H0F5 AC090877.2-201ENST00000558441 1738 ntBASIC24.45■■□□□ 1.5
RNF38Q9H0F5 KRT16P3-201ENST00000439127 1283 ntBASIC24.45■■□□□ 1.5
RNF38Q9H0F5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.45■■□□□ 1.5
RNF38Q9H0F5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.45■■□□□ 1.5
RNF38Q9H0F5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF38Q9H0F5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RNF38Q9H0F5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF38Q9H0F5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF38Q9H0F5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF38Q9H0F5 DUSP8P4-201ENST00000399538 1761 ntBASIC24.44■■□□□ 1.5
RNF38Q9H0F5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF38Q9H0F5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RNF38Q9H0F5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
RNF38Q9H0F5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF38Q9H0F5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.43■■□□□ 1.5
RNF38Q9H0F5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.43■■□□□ 1.5
RNF38Q9H0F5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF38Q9H0F5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF38Q9H0F5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF38Q9H0F5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF38Q9H0F5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF38Q9H0F5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF38Q9H0F5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.42■■□□□ 1.5
RNF38Q9H0F5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF38Q9H0F5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.42■■□□□ 1.5
RNF38Q9H0F5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
RNF38Q9H0F5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF38Q9H0F5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.41■■□□□ 1.5
RNF38Q9H0F5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF38Q9H0F5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF38Q9H0F5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF38Q9H0F5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF38Q9H0F5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF38Q9H0F5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF38Q9H0F5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF38Q9H0F5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.39■■□□□ 1.5
RNF38Q9H0F5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.39■■□□□ 1.49
RNF38Q9H0F5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF38Q9H0F5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RNF38Q9H0F5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF38Q9H0F5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF38Q9H0F5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
RNF38Q9H0F5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF38Q9H0F5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RNF38Q9H0F5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF38Q9H0F5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF38Q9H0F5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RNF38Q9H0F5 AC145676.1-201ENST00000514988 2004 ntBASIC24.36■■□□□ 1.49
RNF38Q9H0F5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RNF38Q9H0F5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF38Q9H0F5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.36■■□□□ 1.49
RNF38Q9H0F5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.36■■□□□ 1.49
RNF38Q9H0F5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF38Q9H0F5 SLC6A10P-202ENST00000431994 2058 ntBASIC24.36■■□□□ 1.49
RNF38Q9H0F5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
RNF38Q9H0F5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF38Q9H0F5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF38Q9H0F5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF38Q9H0F5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF38Q9H0F5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.35■■□□□ 1.49
RNF38Q9H0F5 AC010997.5-201ENST00000609182 354 ntBASIC24.35■■□□□ 1.49
RNF38Q9H0F5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.35■■□□□ 1.49
RNF38Q9H0F5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNF38Q9H0F5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms