Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM54Q969K7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM54Q969K7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM54Q969K7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM54Q969K7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM54Q969K7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM54Q969K7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM54Q969K7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM54Q969K7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM54Q969K7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TMEM54Q969K7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM54Q969K7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM54Q969K7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TMEM54Q969K7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM54Q969K7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM54Q969K7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM54Q969K7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM54Q969K7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM54Q969K7 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM54Q969K7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM54Q969K7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM54Q969K7 AL139125.2-201ENST00000623134 1869 ntBASIC20.74■□□□□ 0.91
TMEM54Q969K7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TMEM54Q969K7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM54Q969K7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TMEM54Q969K7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM54Q969K7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM54Q969K7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.73■□□□□ 0.91
TMEM54Q969K7 PVT1_1.1-201ENST00000615125 194 ntBASIC20.73■□□□□ 0.91
TMEM54Q969K7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM54Q969K7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM54Q969K7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM54Q969K7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM54Q969K7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM54Q969K7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM54Q969K7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM54Q969K7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM54Q969K7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TMEM54Q969K7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM54Q969K7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM54Q969K7 AC022616.5-201ENST00000518796 181 ntBASIC20.71■□□□□ 0.91
TMEM54Q969K7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM54Q969K7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM54Q969K7 AC010980.1-201ENST00000587192 1142 ntBASIC20.71■□□□□ 0.91
TMEM54Q969K7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM54Q969K7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM54Q969K7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM54Q969K7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM54Q969K7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TMEM54Q969K7 AC090877.2-201ENST00000558441 1738 ntBASIC20.7■□□□□ 0.9
TMEM54Q969K7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TMEM54Q969K7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TMEM54Q969K7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM54Q969K7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM54Q969K7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM54Q969K7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM54Q969K7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM54Q969K7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM54Q969K7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TMEM54Q969K7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM54Q969K7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM54Q969K7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM54Q969K7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TMEM54Q969K7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM54Q969K7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM54Q969K7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TMEM54Q969K7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM54Q969K7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM54Q969K7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TMEM54Q969K7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM54Q969K7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM54Q969K7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TMEM54Q969K7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM54Q969K7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM54Q969K7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM54Q969K7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM54Q969K7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
TMEM54Q969K7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM54Q969K7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM54Q969K7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM54Q969K7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM54Q969K7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
TMEM54Q969K7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TMEM54Q969K7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.66■□□□□ 0.9
TMEM54Q969K7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM54Q969K7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM54Q969K7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
TMEM54Q969K7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM54Q969K7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM54Q969K7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM54Q969K7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms