Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CNOT9Q92600 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.58■■□□□ 1.04
CNOT9Q92600 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNOT9Q92600 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNOT9Q92600 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.57■■□□□ 1.04
CNOT9Q92600 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNOT9Q92600 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.57■■□□□ 1.04
CNOT9Q92600 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNOT9Q92600 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNOT9Q92600 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.56■■□□□ 1.04
CNOT9Q92600 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT9Q92600 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT9Q92600 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT9Q92600 AC087393.1-201ENST00000582896 145 ntBASIC21.56■■□□□ 1.04
CNOT9Q92600 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT9Q92600 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT9Q92600 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.56■■□□□ 1.04
CNOT9Q92600 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT9Q92600 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT9Q92600 LINC01124-201ENST00000409786 2117 ntBASIC21.55■■□□□ 1.04
CNOT9Q92600 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT9Q92600 NTF6A-201ENST00000591175 560 ntBASIC21.55■■□□□ 1.04
CNOT9Q92600 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.55■■□□□ 1.04
CNOT9Q92600 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT9Q92600 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT9Q92600 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT9Q92600 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT9Q92600 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
CNOT9Q92600 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
CNOT9Q92600 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CNOT9Q92600 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT9Q92600 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT9Q92600 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNOT9Q92600 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNOT9Q92600 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
CNOT9Q92600 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.54■■□□□ 1.04
CNOT9Q92600 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNOT9Q92600 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CNOT9Q92600 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNOT9Q92600 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.53■■□□□ 1.04
CNOT9Q92600 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.53■■□□□ 1.04
CNOT9Q92600 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.53■■□□□ 1.04
CNOT9Q92600 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNOT9Q92600 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNOT9Q92600 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.53■■□□□ 1.04
CNOT9Q92600 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNOT9Q92600 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNOT9Q92600 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNOT9Q92600 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNOT9Q92600 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNOT9Q92600 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNOT9Q92600 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNOT9Q92600 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CNOT9Q92600 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNOT9Q92600 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNOT9Q92600 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNOT9Q92600 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNOT9Q92600 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNOT9Q92600 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.51■■□□□ 1.03
CNOT9Q92600 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNOT9Q92600 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CNOT9Q92600 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNOT9Q92600 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNOT9Q92600 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.5■■□□□ 1.03
CNOT9Q92600 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.5■■□□□ 1.03
CNOT9Q92600 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNOT9Q92600 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CNOT9Q92600 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNOT9Q92600 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CNOT9Q92600 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CNOT9Q92600 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CNOT9Q92600 DUX4L18-201ENST00000553347 1267 ntBASIC21.49■■□□□ 1.03
CNOT9Q92600 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.49■■□□□ 1.03
CNOT9Q92600 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CNOT9Q92600 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CNOT9Q92600 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNOT9Q92600 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
CNOT9Q92600 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNOT9Q92600 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CNOT9Q92600 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNOT9Q92600 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.48■■□□□ 1.03
CNOT9Q92600 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNOT9Q92600 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNOT9Q92600 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNOT9Q92600 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNOT9Q92600 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.47■■□□□ 1.03
CNOT9Q92600 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CNOT9Q92600 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNOT9Q92600 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.47■■□□□ 1.03
CNOT9Q92600 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNOT9Q92600 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNOT9Q92600 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNOT9Q92600 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CNOT9Q92600 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.46■■□□□ 1.03
CNOT9Q92600 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNOT9Q92600 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNOT9Q92600 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.46■■□□□ 1.03
CNOT9Q92600 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.46■■□□□ 1.03
CNOT9Q92600 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNOT9Q92600 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms