Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 AC138932.3-201ENST00000567634 1902 ntBASIC31.26■■■□□ 2.59
CCDC146Q8IYE0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC146Q8IYE0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC146Q8IYE0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC146Q8IYE0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC146Q8IYE0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC146Q8IYE0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
CCDC146Q8IYE0 RARRES2P1-201ENST00000474487 481 ntBASIC31.24■■■□□ 2.59
CCDC146Q8IYE0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC146Q8IYE0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.24■■■□□ 2.59
CCDC146Q8IYE0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC146Q8IYE0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC146Q8IYE0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC146Q8IYE0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.22■■■□□ 2.59
CCDC146Q8IYE0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC146Q8IYE0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC146Q8IYE0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC146Q8IYE0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC146Q8IYE0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC146Q8IYE0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC146Q8IYE0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.21■■■□□ 2.59
CCDC146Q8IYE0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC146Q8IYE0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC146Q8IYE0 AL592295.1-201ENST00000400984 884 ntBASIC31.2■■■□□ 2.59
CCDC146Q8IYE0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC146Q8IYE0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
CCDC146Q8IYE0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC146Q8IYE0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
CCDC146Q8IYE0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
CCDC146Q8IYE0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC146Q8IYE0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC146Q8IYE0 MIR4508-201ENST00000584178 70 ntBASIC31.19■■■□□ 2.58
CCDC146Q8IYE0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC146Q8IYE0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CCDC146Q8IYE0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.19■■■□□ 2.58
CCDC146Q8IYE0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC146Q8IYE0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.18■■■□□ 2.58
CCDC146Q8IYE0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC146Q8IYE0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC146Q8IYE0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC146Q8IYE0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC146Q8IYE0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC146Q8IYE0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC146Q8IYE0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC146Q8IYE0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC146Q8IYE0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC146Q8IYE0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
CCDC146Q8IYE0 AC103724.3-201ENST00000564481 992 ntBASIC31.16■■■□□ 2.58
CCDC146Q8IYE0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC146Q8IYE0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC31.16■■■□□ 2.58
CCDC146Q8IYE0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC31.16■■■□□ 2.58
CCDC146Q8IYE0 AC142381.3-201ENST00000568208 1670 ntBASIC31.16■■■□□ 2.58
CCDC146Q8IYE0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC146Q8IYE0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.15■■■□□ 2.58
CCDC146Q8IYE0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC146Q8IYE0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.14■■■□□ 2.58
CCDC146Q8IYE0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC146Q8IYE0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC146Q8IYE0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC146Q8IYE0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.14■■■□□ 2.58
CCDC146Q8IYE0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.13■■■□□ 2.57
CCDC146Q8IYE0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.13■■■□□ 2.57
CCDC146Q8IYE0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
CCDC146Q8IYE0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC31.12■■■□□ 2.57
CCDC146Q8IYE0 YBX1P4-201ENST00000392794 808 ntBASIC31.12■■■□□ 2.57
CCDC146Q8IYE0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.12■■■□□ 2.57
CCDC146Q8IYE0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC146Q8IYE0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC146Q8IYE0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.12■■■□□ 2.57
CCDC146Q8IYE0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC146Q8IYE0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.12■■■□□ 2.57
CCDC146Q8IYE0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC146Q8IYE0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC146Q8IYE0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
CCDC146Q8IYE0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC146Q8IYE0 AC120024.1-201ENST00000562672 995 ntBASIC31.1■■■□□ 2.57
CCDC146Q8IYE0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC146Q8IYE0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.09■■■□□ 2.57
CCDC146Q8IYE0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
CCDC146Q8IYE0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.09■■■□□ 2.57
CCDC146Q8IYE0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.09■■■□□ 2.57
CCDC146Q8IYE0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC146Q8IYE0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
CCDC146Q8IYE0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC146Q8IYE0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC146Q8IYE0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC146Q8IYE0 AC022616.5-201ENST00000518796 181 ntBASIC31.07■■■□□ 2.56
CCDC146Q8IYE0 MIR6089-201ENST00000616698 64 ntBASIC31.07■■■□□ 2.56
CCDC146Q8IYE0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.07■■■□□ 2.56
CCDC146Q8IYE0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC146Q8IYE0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.06■■■□□ 2.56
CCDC146Q8IYE0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC146Q8IYE0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC146Q8IYE0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC146Q8IYE0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC146Q8IYE0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC146Q8IYE0 AC090877.2-201ENST00000558441 1738 ntBASIC31.05■■■□□ 2.56
CCDC146Q8IYE0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC146Q8IYE0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC146Q8IYE0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms