Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
SPHKAPQ2M3C7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
SPHKAPQ2M3C7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC34.36■■■■□ 3.09
SPHKAPQ2M3C7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
SPHKAPQ2M3C7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC34.36■■■■□ 3.09
SPHKAPQ2M3C7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
SPHKAPQ2M3C7 AL136116.3-201ENST00000402907 1138 ntBASIC34.35■■■■□ 3.09
SPHKAPQ2M3C7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
SPHKAPQ2M3C7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
SPHKAPQ2M3C7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC34.35■■■■□ 3.09
SPHKAPQ2M3C7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC34.34■■■■□ 3.09
SPHKAPQ2M3C7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SPHKAPQ2M3C7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC34.34■■■■□ 3.09
SPHKAPQ2M3C7 AC110285.6-201ENST00000617652 491 ntBASIC34.34■■■■□ 3.09
SPHKAPQ2M3C7 RASSF1-AS1-201ENST00000629828 790 ntBASIC34.34■■■■□ 3.09
SPHKAPQ2M3C7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SPHKAPQ2M3C7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
SPHKAPQ2M3C7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
SPHKAPQ2M3C7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC34.33■■■■□ 3.09
SPHKAPQ2M3C7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
SPHKAPQ2M3C7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
SPHKAPQ2M3C7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SPHKAPQ2M3C7 AC010501.1-201ENST00000606270 1962 ntBASIC34.33■■■■□ 3.09
SPHKAPQ2M3C7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC34.33■■■■□ 3.09
SPHKAPQ2M3C7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC34.32■■■■□ 3.08
SPHKAPQ2M3C7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC34.32■■■■□ 3.08
SPHKAPQ2M3C7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC34.32■■■■□ 3.08
SPHKAPQ2M3C7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC34.32■■■■□ 3.08
SPHKAPQ2M3C7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SPHKAPQ2M3C7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC34.31■■■■□ 3.08
SPHKAPQ2M3C7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC34.31■■■■□ 3.08
SPHKAPQ2M3C7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC34.31■■■■□ 3.08
SPHKAPQ2M3C7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SPHKAPQ2M3C7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC34.3■■■■□ 3.08
SPHKAPQ2M3C7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
SPHKAPQ2M3C7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC34.3■■■■□ 3.08
SPHKAPQ2M3C7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC34.3■■■■□ 3.08
SPHKAPQ2M3C7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC34.3■■■■□ 3.08
SPHKAPQ2M3C7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC34.3■■■■□ 3.08
SPHKAPQ2M3C7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
SPHKAPQ2M3C7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SPHKAPQ2M3C7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SPHKAPQ2M3C7 AC097639.1-201ENST00000565519 1891 ntBASIC34.28■■■■□ 3.08
SPHKAPQ2M3C7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC34.28■■■■□ 3.08
SPHKAPQ2M3C7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SPHKAPQ2M3C7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
SPHKAPQ2M3C7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
SPHKAPQ2M3C7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
SPHKAPQ2M3C7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC34.26■■■■□ 3.08
SPHKAPQ2M3C7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC34.26■■■■□ 3.08
SPHKAPQ2M3C7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
SPHKAPQ2M3C7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
SPHKAPQ2M3C7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
SPHKAPQ2M3C7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
SPHKAPQ2M3C7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC34.25■■■■□ 3.07
SPHKAPQ2M3C7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC34.25■■■■□ 3.07
SPHKAPQ2M3C7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC34.24■■■■□ 3.07
SPHKAPQ2M3C7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SPHKAPQ2M3C7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC34.24■■■■□ 3.07
SPHKAPQ2M3C7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
SPHKAPQ2M3C7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SPHKAPQ2M3C7 AC090877.2-201ENST00000558441 1738 ntBASIC34.23■■■■□ 3.07
SPHKAPQ2M3C7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
SPHKAPQ2M3C7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SPHKAPQ2M3C7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SPHKAPQ2M3C7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
SPHKAPQ2M3C7 AK3-203ENST00000447596 705 ntTSL 2 BASIC34.23■■■■□ 3.07
SPHKAPQ2M3C7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC34.23■■■■□ 3.07
SPHKAPQ2M3C7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPHKAPQ2M3C7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC34.22■■■■□ 3.07
SPHKAPQ2M3C7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPHKAPQ2M3C7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
SPHKAPQ2M3C7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPHKAPQ2M3C7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC34.21■■■■□ 3.07
SPHKAPQ2M3C7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC34.21■■■■□ 3.07
SPHKAPQ2M3C7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC34.21■■■■□ 3.07
SPHKAPQ2M3C7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
SPHKAPQ2M3C7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
SPHKAPQ2M3C7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
SPHKAPQ2M3C7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
SPHKAPQ2M3C7 AL139246.5-201ENST00000606645 996 ntBASIC34.21■■■■□ 3.07
SPHKAPQ2M3C7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
SPHKAPQ2M3C7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC34.2■■■■□ 3.07
SPHKAPQ2M3C7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC34.19■■■■□ 3.06
SPHKAPQ2M3C7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC34.19■■■■□ 3.06
SPHKAPQ2M3C7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC34.19■■■■□ 3.06
SPHKAPQ2M3C7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC34.19■■■■□ 3.06
SPHKAPQ2M3C7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
SPHKAPQ2M3C7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC34.18■■■■□ 3.06
SPHKAPQ2M3C7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
SPHKAPQ2M3C7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC34.18■■■■□ 3.06
SPHKAPQ2M3C7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC34.18■■■■□ 3.06
SPHKAPQ2M3C7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
SPHKAPQ2M3C7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
SPHKAPQ2M3C7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
SPHKAPQ2M3C7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC34.17■■■■□ 3.06
SPHKAPQ2M3C7 AL356740.2-201ENST00000601559 647 ntBASIC34.17■■■■□ 3.06
SPHKAPQ2M3C7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC34.17■■■■□ 3.06
SPHKAPQ2M3C7 RALB-208ENST00000631312 311 ntTSL 5 BASIC34.17■■■■□ 3.06
SPHKAPQ2M3C7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC34.17■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms