Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
ATP6V1AP38606 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATP6V1AP38606 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATP6V1AP38606 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.33■■■□□ 2.45
ATP6V1AP38606 RARRES2P6-201ENST00000567333 442 ntBASIC30.33■■■□□ 2.45
ATP6V1AP38606 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
ATP6V1AP38606 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
ATP6V1AP38606 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
ATP6V1AP38606 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
ATP6V1AP38606 UNC93B3-201ENST00000308076 687 ntBASIC30.32■■■□□ 2.44
ATP6V1AP38606 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.32■■■□□ 2.44
ATP6V1AP38606 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.32■■■□□ 2.44
ATP6V1AP38606 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
ATP6V1AP38606 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
ATP6V1AP38606 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.31■■■□□ 2.44
ATP6V1AP38606 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.31■■■□□ 2.44
ATP6V1AP38606 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.3■■■□□ 2.44
ATP6V1AP38606 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.3■■■□□ 2.44
ATP6V1AP38606 MIR6722-201ENST00000617286 78 ntBASIC30.3■■■□□ 2.44
ATP6V1AP38606 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ATP6V1AP38606 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP6V1AP38606 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.29■■■□□ 2.44
ATP6V1AP38606 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.29■■■□□ 2.44
ATP6V1AP38606 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.29■■■□□ 2.44
ATP6V1AP38606 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP6V1AP38606 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
ATP6V1AP38606 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 AL031432.3-201ENST00000607698 485 ntBASIC30.28■■■□□ 2.44
ATP6V1AP38606 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
ATP6V1AP38606 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.27■■■□□ 2.44
ATP6V1AP38606 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
ATP6V1AP38606 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ATP6V1AP38606 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.27■■■□□ 2.44
ATP6V1AP38606 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
ATP6V1AP38606 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.26■■■□□ 2.44
ATP6V1AP38606 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V1AP38606 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V1AP38606 SUDS3P1-201ENST00000505831 966 ntBASIC30.26■■■□□ 2.43
ATP6V1AP38606 AL136162.1-201ENST00000607711 1078 ntBASIC30.26■■■□□ 2.43
ATP6V1AP38606 AC092666.2-201ENST00000613287 246 ntBASIC30.26■■■□□ 2.43
ATP6V1AP38606 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V1AP38606 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V1AP38606 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V1AP38606 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V1AP38606 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.25■■■□□ 2.43
ATP6V1AP38606 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V1AP38606 AC090877.2-201ENST00000558441 1738 ntBASIC30.25■■■□□ 2.43
ATP6V1AP38606 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ATP6V1AP38606 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.24■■■□□ 2.43
ATP6V1AP38606 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.24■■■□□ 2.43
ATP6V1AP38606 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ATP6V1AP38606 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
ATP6V1AP38606 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V1AP38606 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V1AP38606 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V1AP38606 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 AC026271.2-201ENST00000428091 497 ntBASIC30.23■■■□□ 2.43
ATP6V1AP38606 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V1AP38606 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATP6V1AP38606 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATP6V1AP38606 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
ATP6V1AP38606 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATP6V1AP38606 AC135279.3-201ENST00000610945 1311 ntBASIC30.22■■■□□ 2.43
ATP6V1AP38606 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ATP6V1AP38606 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
ATP6V1AP38606 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.21■■■□□ 2.43
ATP6V1AP38606 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
ATP6V1AP38606 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
ATP6V1AP38606 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.2■■■□□ 2.43
ATP6V1AP38606 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.2■■■□□ 2.43
ATP6V1AP38606 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
ATP6V1AP38606 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
ATP6V1AP38606 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
ATP6V1AP38606 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.19■■■□□ 2.42
ATP6V1AP38606 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
ATP6V1AP38606 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
ATP6V1AP38606 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ATP6V1AP38606 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ATP6V1AP38606 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.18■■■□□ 2.42
ATP6V1AP38606 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.18■■■□□ 2.42
ATP6V1AP38606 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.18■■■□□ 2.42
ATP6V1AP38606 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
ATP6V1AP38606 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ATP6V1AP38606 SRD5A1P1-201ENST00000442297 786 ntBASIC30.17■■■□□ 2.42
ATP6V1AP38606 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.17■■■□□ 2.42
ATP6V1AP38606 AC024257.2-201ENST00000549699 147 ntBASIC30.17■■■□□ 2.42
ATP6V1AP38606 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms