Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
HMGCLP35914 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
HMGCLP35914 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
HMGCLP35914 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.5■■□□□ 1.35
HMGCLP35914 MIR4508-201ENST00000584178 70 ntBASIC23.5■■□□□ 1.35
HMGCLP35914 MIR6089-201ENST00000616698 64 ntBASIC23.5■■□□□ 1.35
HMGCLP35914 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCLP35914 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.5■■□□□ 1.35
HMGCLP35914 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCLP35914 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.49■■□□□ 1.35
HMGCLP35914 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCLP35914 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCLP35914 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCLP35914 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCLP35914 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.49■■□□□ 1.35
HMGCLP35914 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.49■■□□□ 1.35
HMGCLP35914 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGCLP35914 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCLP35914 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCLP35914 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.48■■□□□ 1.35
HMGCLP35914 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGCLP35914 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGCLP35914 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.48■■□□□ 1.35
HMGCLP35914 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCLP35914 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
HMGCLP35914 AC103834.1-201ENST00000520383 144 ntBASIC23.47■■□□□ 1.35
HMGCLP35914 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCLP35914 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCLP35914 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.47■■□□□ 1.35
HMGCLP35914 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
HMGCLP35914 AC138932.3-201ENST00000567634 1902 ntBASIC23.47■■□□□ 1.35
HMGCLP35914 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.47■■□□□ 1.35
HMGCLP35914 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.47■■□□□ 1.35
HMGCLP35914 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.46■■□□□ 1.35
HMGCLP35914 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
HMGCLP35914 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.46■■□□□ 1.35
HMGCLP35914 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
HMGCLP35914 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HMGCLP35914 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.45■■□□□ 1.35
HMGCLP35914 AP003733.4-201ENST00000623785 1697 ntBASIC23.45■■□□□ 1.34
HMGCLP35914 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.45■■□□□ 1.34
HMGCLP35914 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.45■■□□□ 1.34
HMGCLP35914 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HMGCLP35914 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HMGCLP35914 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HMGCLP35914 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.44■■□□□ 1.34
HMGCLP35914 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HMGCLP35914 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.44■■□□□ 1.34
HMGCLP35914 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.44■■□□□ 1.34
HMGCLP35914 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.43■■□□□ 1.34
HMGCLP35914 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.43■■□□□ 1.34
HMGCLP35914 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
HMGCLP35914 AC090877.2-201ENST00000558441 1738 ntBASIC23.43■■□□□ 1.34
HMGCLP35914 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.43■■□□□ 1.34
HMGCLP35914 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HMGCLP35914 AC011551.1-201ENST00000614101 683 ntBASIC23.43■■□□□ 1.34
HMGCLP35914 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.43■■□□□ 1.34
HMGCLP35914 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HMGCLP35914 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
HMGCLP35914 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HMGCLP35914 YBX1P4-201ENST00000392794 808 ntBASIC23.42■■□□□ 1.34
HMGCLP35914 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HMGCLP35914 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.42■■□□□ 1.34
HMGCLP35914 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.42■■□□□ 1.34
HMGCLP35914 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.41■■□□□ 1.34
HMGCLP35914 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HMGCLP35914 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
HMGCLP35914 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HMGCLP35914 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.41■■□□□ 1.34
HMGCLP35914 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.41■■□□□ 1.34
HMGCLP35914 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HMGCLP35914 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.41■■□□□ 1.34
HMGCLP35914 KRT8P33-201ENST00000508125 1423 ntBASIC23.41■■□□□ 1.34
HMGCLP35914 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HMGCLP35914 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
HMGCLP35914 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
HMGCLP35914 KRT18P24-201ENST00000344739 1156 ntBASIC23.4■■□□□ 1.34
HMGCLP35914 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.4■■□□□ 1.34
HMGCLP35914 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
HMGCLP35914 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.4■■□□□ 1.34
HMGCLP35914 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HMGCLP35914 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HMGCLP35914 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
HMGCLP35914 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.39■■□□□ 1.33
HMGCLP35914 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HMGCLP35914 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HMGCLP35914 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HMGCLP35914 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HMGCLP35914 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HMGCLP35914 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.37■■□□□ 1.33
HMGCLP35914 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
HMGCLP35914 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
HMGCLP35914 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.37■■□□□ 1.33
HMGCLP35914 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.37■■□□□ 1.33
HMGCLP35914 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HMGCLP35914 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HMGCLP35914 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HMGCLP35914 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HMGCLP35914 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HMGCLP35914 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms