Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
THBS1P07996 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
THBS1P07996 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
THBS1P07996 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.61■■□□□ 1.05
THBS1P07996 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.6■■□□□ 1.05
THBS1P07996 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
THBS1P07996 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
THBS1P07996 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
THBS1P07996 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.59■■□□□ 1.05
THBS1P07996 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
THBS1P07996 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
THBS1P07996 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.59■■□□□ 1.05
THBS1P07996 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
THBS1P07996 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
THBS1P07996 SPCS2P3-201ENST00000500401 656 ntBASIC21.59■■□□□ 1.05
THBS1P07996 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.59■■□□□ 1.05
THBS1P07996 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
THBS1P07996 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
THBS1P07996 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
THBS1P07996 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
THBS1P07996 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
THBS1P07996 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
THBS1P07996 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.58■■□□□ 1.05
THBS1P07996 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
THBS1P07996 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
THBS1P07996 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.58■■□□□ 1.04
THBS1P07996 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
THBS1P07996 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.57■■□□□ 1.04
THBS1P07996 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
THBS1P07996 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
THBS1P07996 MIR6765-201ENST00000614092 87 ntBASIC21.57■■□□□ 1.04
THBS1P07996 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
THBS1P07996 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
THBS1P07996 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
THBS1P07996 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
THBS1P07996 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.57■■□□□ 1.04
THBS1P07996 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.57■■□□□ 1.04
THBS1P07996 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
THBS1P07996 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
THBS1P07996 AC087393.1-201ENST00000582896 145 ntBASIC21.56■■□□□ 1.04
THBS1P07996 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
THBS1P07996 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.56■■□□□ 1.04
THBS1P07996 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.55■■□□□ 1.04
THBS1P07996 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
THBS1P07996 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
THBS1P07996 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
THBS1P07996 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
THBS1P07996 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.55■■□□□ 1.04
THBS1P07996 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
THBS1P07996 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 DUX4L9-201ENST00000449051 1259 ntBASIC21.54■■□□□ 1.04
THBS1P07996 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.54■■□□□ 1.04
THBS1P07996 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
THBS1P07996 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THBS1P07996 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.54■■□□□ 1.04
THBS1P07996 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
THBS1P07996 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
THBS1P07996 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
THBS1P07996 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.53■■□□□ 1.04
THBS1P07996 U85056.1-201ENST00000616429 682 ntBASIC21.53■■□□□ 1.04
THBS1P07996 AC012354.3-201ENST00000623734 483 ntBASIC21.53■■□□□ 1.04
THBS1P07996 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
THBS1P07996 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.53■■□□□ 1.04
THBS1P07996 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
THBS1P07996 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
THBS1P07996 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
THBS1P07996 HLA-L-211ENST00000482052 1765 ntBASIC21.52■■□□□ 1.04
THBS1P07996 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
THBS1P07996 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
THBS1P07996 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
THBS1P07996 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.52■■□□□ 1.03
THBS1P07996 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
THBS1P07996 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
THBS1P07996 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
THBS1P07996 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.51■■□□□ 1.03
THBS1P07996 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
THBS1P07996 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
THBS1P07996 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
THBS1P07996 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.51■■□□□ 1.03
THBS1P07996 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
THBS1P07996 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
THBS1P07996 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
THBS1P07996 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THBS1P07996 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THBS1P07996 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THBS1P07996 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
THBS1P07996 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.5■■□□□ 1.03
THBS1P07996 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THBS1P07996 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
THBS1P07996 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
THBS1P07996 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
THBS1P07996 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms