Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBP04114 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOBP04114 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.96□□□□□ -0.02
APOBP04114 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOBP04114 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.95□□□□□ -0.02
APOBP04114 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.95□□□□□ -0.02
APOBP04114 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
APOBP04114 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOBP04114 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.95□□□□□ -0.02
APOBP04114 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOBP04114 RASA4CP-201ENST00000424092 1398 ntBASIC14.95□□□□□ -0.02
APOBP04114 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOBP04114 AC091305.1-201ENST00000479476 895 ntBASIC14.95□□□□□ -0.02
APOBP04114 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOBP04114 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOBP04114 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.94□□□□□ -0.02
APOBP04114 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOBP04114 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.94□□□□□ -0.02
APOBP04114 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOBP04114 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.94□□□□□ -0.02
APOBP04114 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.94□□□□□ -0.02
APOBP04114 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
APOBP04114 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
APOBP04114 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
APOBP04114 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOBP04114 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.94□□□□□ -0.02
APOBP04114 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
APOBP04114 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOBP04114 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.93□□□□□ -0.02
APOBP04114 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBP04114 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOBP04114 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
APOBP04114 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.93□□□□□ -0.02
APOBP04114 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBP04114 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBP04114 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBP04114 SRD5A1P1-201ENST00000442297 786 ntBASIC14.92□□□□□ -0.02
APOBP04114 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBP04114 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC14.92□□□□□ -0.02
APOBP04114 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC14.92□□□□□ -0.02
APOBP04114 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.92□□□□□ -0.02
APOBP04114 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBP04114 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBP04114 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBP04114 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBP04114 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBP04114 RARRES2P11-201ENST00000635158 484 ntBASIC14.92□□□□□ -0.02
APOBP04114 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOBP04114 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.91□□□□□ -0.02
APOBP04114 LINC01003-201ENST00000564834 1764 ntBASIC14.91□□□□□ -0.02
APOBP04114 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
APOBP04114 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.91□□□□□ -0.02
APOBP04114 AC022517.1-201ENST00000592429 346 ntBASIC14.91□□□□□ -0.02
APOBP04114 AL031602.1-201ENST00000633169 911 ntBASIC14.91□□□□□ -0.02
APOBP04114 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.91□□□□□ -0.02
APOBP04114 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOBP04114 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.9□□□□□ -0.02
APOBP04114 IKBKGP1-201ENST00000612193 1073 ntBASIC14.9□□□□□ -0.02
APOBP04114 SYT6-210ENST00000641643 1587 ntBASIC14.9□□□□□ -0.02
APOBP04114 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.9□□□□□ -0.02
APOBP04114 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
APOBP04114 AC092437.1-201ENST00000624794 1048 ntBASIC14.9□□□□□ -0.02
APOBP04114 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOBP04114 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.9□□□□□ -0.02
APOBP04114 IRS3P-201ENST00000223076 1006 ntBASIC14.9□□□□□ -0.02
APOBP04114 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOBP04114 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
APOBP04114 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
APOBP04114 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOBP04114 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOBP04114 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOBP04114 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOBP04114 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOBP04114 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOBP04114 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOBP04114 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOBP04114 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
APOBP04114 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.88□□□□□ -0.03
APOBP04114 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.88□□□□□ -0.03
APOBP04114 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 SERBP1P1-201ENST00000396021 1160 ntBASIC14.88□□□□□ -0.03
APOBP04114 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.88□□□□□ -0.03
APOBP04114 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.88□□□□□ -0.03
APOBP04114 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBP04114 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBP04114 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.87□□□□□ -0.03
APOBP04114 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBP04114 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOBP04114 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBP04114 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBP04114 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBP04114 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms