Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC15.53■□□□□ 0.08
KRTAP4-1Q9BYQ7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
KRTAP4-1Q9BYQ7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC15.52■□□□□ 0.08
KRTAP4-1Q9BYQ7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
KRTAP4-1Q9BYQ7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRTAP4-1Q9BYQ7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC15.5■□□□□ 0.07
KRTAP4-1Q9BYQ7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRTAP4-1Q9BYQ7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC15.48■□□□□ 0.07
KRTAP4-1Q9BYQ7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC15.48■□□□□ 0.07
KRTAP4-1Q9BYQ7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRTAP4-1Q9BYQ7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC15.47■□□□□ 0.07
KRTAP4-1Q9BYQ7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
KRTAP4-1Q9BYQ7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC15.46■□□□□ 0.07
KRTAP4-1Q9BYQ7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
KRTAP4-1Q9BYQ7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRTAP4-1Q9BYQ7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRTAP4-1Q9BYQ7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC15.4■□□□□ 0.06
KRTAP4-1Q9BYQ7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRTAP4-1Q9BYQ7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC15.39■□□□□ 0.05
KRTAP4-1Q9BYQ7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC15.39■□□□□ 0.05
KRTAP4-1Q9BYQ7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRTAP4-1Q9BYQ7 RARRES2P7-201ENST00000567349 469 ntBASIC15.36■□□□□ 0.05
KRTAP4-1Q9BYQ7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
KRTAP4-1Q9BYQ7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC15.35■□□□□ 0.05
KRTAP4-1Q9BYQ7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC15.32■□□□□ 0.04
KRTAP4-1Q9BYQ7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRTAP4-1Q9BYQ7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRTAP4-1Q9BYQ7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRTAP4-1Q9BYQ7 AC136428.2-201ENST00000563187 214 ntBASIC15.3■□□□□ 0.04
KRTAP4-1Q9BYQ7 AC097358.2-201ENST00000607541 1159 ntBASIC15.29■□□□□ 0.04
KRTAP4-1Q9BYQ7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRTAP4-1Q9BYQ7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC15.26■□□□□ 0.03
KRTAP4-1Q9BYQ7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRTAP4-1Q9BYQ7 SUZ12P1-203ENST00000578195 985 ntBASIC15.25■□□□□ 0.03
KRTAP4-1Q9BYQ7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KRTAP4-1Q9BYQ7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRTAP4-1Q9BYQ7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRTAP4-1Q9BYQ7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC15.24■□□□□ 0.03
KRTAP4-1Q9BYQ7 SETD8P1-201ENST00000623146 1180 ntBASIC15.24■□□□□ 0.03
KRTAP4-1Q9BYQ7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRTAP4-1Q9BYQ7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC15.21■□□□□ 0.03
KRTAP4-1Q9BYQ7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC15.21■□□□□ 0.03
KRTAP4-1Q9BYQ7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC15.2■□□□□ 0.02
KRTAP4-1Q9BYQ7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRTAP4-1Q9BYQ7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRTAP4-1Q9BYQ7 RPS2P35-201ENST00000443417 897 ntBASIC15.18■□□□□ 0.02
KRTAP4-1Q9BYQ7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
KRTAP4-1Q9BYQ7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRTAP4-1Q9BYQ7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC15.17■□□□□ 0.02
KRTAP4-1Q9BYQ7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC15.17■□□□□ 0.02
KRTAP4-1Q9BYQ7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC15.17■□□□□ 0.02
KRTAP4-1Q9BYQ7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRTAP4-1Q9BYQ7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC15.15■□□□□ 0.02
KRTAP4-1Q9BYQ7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC15.15■□□□□ 0.02
KRTAP4-1Q9BYQ7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRTAP4-1Q9BYQ7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC15.14■□□□□ 0.01
KRTAP4-1Q9BYQ7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRTAP4-1Q9BYQ7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRTAP4-1Q9BYQ7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRTAP4-1Q9BYQ7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRTAP4-1Q9BYQ7 AC145285.7-201ENST00000614819 1539 ntBASIC15.11■□□□□ 0.01
KRTAP4-1Q9BYQ7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC15.1■□□□□ 0.01
KRTAP4-1Q9BYQ7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC15.1■□□□□ 0.01
KRTAP4-1Q9BYQ7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
KRTAP4-1Q9BYQ7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRTAP4-1Q9BYQ7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
KRTAP4-1Q9BYQ7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC15.06■□□□□ 0
KRTAP4-1Q9BYQ7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC15.06■□□□□ 0
KRTAP4-1Q9BYQ7 CAHM-201ENST00000604200 896 ntBASIC15.06■□□□□ 0
KRTAP4-1Q9BYQ7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.05■□□□□ -0
KRTAP4-1Q9BYQ7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRTAP4-1Q9BYQ7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRTAP4-1Q9BYQ7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC15.04■□□□□ -0
KRTAP4-1Q9BYQ7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC15□□□□□ -0.01
KRTAP4-1Q9BYQ7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KRTAP4-1Q9BYQ7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC14.99□□□□□ -0.01
KRTAP4-1Q9BYQ7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRTAP4-1Q9BYQ7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC14.96□□□□□ -0.01
KRTAP4-1Q9BYQ7 AL162393.1-201ENST00000437852 946 ntBASIC14.96□□□□□ -0.01
KRTAP4-1Q9BYQ7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRTAP4-1Q9BYQ7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KRTAP4-1Q9BYQ7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRTAP4-1Q9BYQ7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
KRTAP4-1Q9BYQ7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KRTAP4-1Q9BYQ7 MVK-208ENST00000539696 608 ntTSL 5 BASIC14.93□□□□□ -0.02
KRTAP4-1Q9BYQ7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
KRTAP4-1Q9BYQ7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KRTAP4-1Q9BYQ7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KRTAP4-1Q9BYQ7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRTAP4-1Q9BYQ7 AL391121.1-201ENST00000607967 1349 ntBASIC14.91□□□□□ -0.02
KRTAP4-1Q9BYQ7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRTAP4-1Q9BYQ7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRTAP4-1Q9BYQ7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRTAP4-1Q9BYQ7 AL133380.1-201ENST00000506013 324 ntBASIC14.88□□□□□ -0.03
KRTAP4-1Q9BYQ7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC14.88□□□□□ -0.03
KRTAP4-1Q9BYQ7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRTAP4-1Q9BYQ7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRTAP4-1Q9BYQ7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
KRTAP4-1Q9BYQ7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRTAP4-1Q9BYQ7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms