Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRTAP4-1Q9BYQ7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC18.06■□□□□ 0.48
KRTAP4-1Q9BYQ7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
KRTAP4-1Q9BYQ7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRTAP4-1Q9BYQ7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRTAP4-1Q9BYQ7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KRTAP4-1Q9BYQ7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRTAP4-1Q9BYQ7 AL356512.1-201ENST00000607453 1739 ntBASIC17.43■□□□□ 0.38
KRTAP4-1Q9BYQ7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
KRTAP4-1Q9BYQ7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC17.22■□□□□ 0.35
KRTAP4-1Q9BYQ7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC17.2■□□□□ 0.34
KRTAP4-1Q9BYQ7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC17.2■□□□□ 0.34
KRTAP4-1Q9BYQ7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRTAP4-1Q9BYQ7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRTAP4-1Q9BYQ7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRTAP4-1Q9BYQ7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRTAP4-1Q9BYQ7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRTAP4-1Q9BYQ7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
KRTAP4-1Q9BYQ7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRTAP4-1Q9BYQ7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRTAP4-1Q9BYQ7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRTAP4-1Q9BYQ7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRTAP4-1Q9BYQ7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC16.74■□□□□ 0.27
KRTAP4-1Q9BYQ7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC16.73■□□□□ 0.27
KRTAP4-1Q9BYQ7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC16.73■□□□□ 0.27
KRTAP4-1Q9BYQ7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRTAP4-1Q9BYQ7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KRTAP4-1Q9BYQ7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC16.7■□□□□ 0.26
KRTAP4-1Q9BYQ7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRTAP4-1Q9BYQ7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRTAP4-1Q9BYQ7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRTAP4-1Q9BYQ7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC16.56■□□□□ 0.24
KRTAP4-1Q9BYQ7 ZNRF2P1-201ENST00000441407 443 ntBASIC16.46■□□□□ 0.23
KRTAP4-1Q9BYQ7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC16.46■□□□□ 0.23
KRTAP4-1Q9BYQ7 AC006077.2-201ENST00000623591 457 ntBASIC16.44■□□□□ 0.22
KRTAP4-1Q9BYQ7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRTAP4-1Q9BYQ7 AC015813.7-201ENST00000623294 581 ntBASIC16.42■□□□□ 0.22
KRTAP4-1Q9BYQ7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRTAP4-1Q9BYQ7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC16.32■□□□□ 0.2
KRTAP4-1Q9BYQ7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC16.3■□□□□ 0.2
KRTAP4-1Q9BYQ7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRTAP4-1Q9BYQ7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRTAP4-1Q9BYQ7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRTAP4-1Q9BYQ7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRTAP4-1Q9BYQ7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRTAP4-1Q9BYQ7 AP002365.1-201ENST00000603448 772 ntBASIC16.07■□□□□ 0.16
KRTAP4-1Q9BYQ7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC16.05■□□□□ 0.16
KRTAP4-1Q9BYQ7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
KRTAP4-1Q9BYQ7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRTAP4-1Q9BYQ7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRTAP4-1Q9BYQ7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC16■□□□□ 0.15
KRTAP4-1Q9BYQ7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRTAP4-1Q9BYQ7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
KRTAP4-1Q9BYQ7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC15.99■□□□□ 0.15
KRTAP4-1Q9BYQ7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC15.96■□□□□ 0.15
KRTAP4-1Q9BYQ7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRTAP4-1Q9BYQ7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRTAP4-1Q9BYQ7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC15.95■□□□□ 0.14
KRTAP4-1Q9BYQ7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRTAP4-1Q9BYQ7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC15.93■□□□□ 0.14
KRTAP4-1Q9BYQ7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRTAP4-1Q9BYQ7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRTAP4-1Q9BYQ7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC15.86■□□□□ 0.13
KRTAP4-1Q9BYQ7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
KRTAP4-1Q9BYQ7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRTAP4-1Q9BYQ7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
KRTAP4-1Q9BYQ7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC15.8■□□□□ 0.12
KRTAP4-1Q9BYQ7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRTAP4-1Q9BYQ7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRTAP4-1Q9BYQ7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRTAP4-1Q9BYQ7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRTAP4-1Q9BYQ7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRTAP4-1Q9BYQ7 DYNLL1-208ENST00000550178 581 ntBASIC15.76■□□□□ 0.11
KRTAP4-1Q9BYQ7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRTAP4-1Q9BYQ7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRTAP4-1Q9BYQ7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
KRTAP4-1Q9BYQ7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC15.74■□□□□ 0.11
KRTAP4-1Q9BYQ7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC15.74■□□□□ 0.11
KRTAP4-1Q9BYQ7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRTAP4-1Q9BYQ7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
KRTAP4-1Q9BYQ7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRTAP4-1Q9BYQ7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRTAP4-1Q9BYQ7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
KRTAP4-1Q9BYQ7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRTAP4-1Q9BYQ7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC15.68■□□□□ 0.1
KRTAP4-1Q9BYQ7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRTAP4-1Q9BYQ7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
KRTAP4-1Q9BYQ7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRTAP4-1Q9BYQ7 AL031258.1-201ENST00000623562 325 ntBASIC15.65■□□□□ 0.1
KRTAP4-1Q9BYQ7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC15.63■□□□□ 0.09
KRTAP4-1Q9BYQ7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRTAP4-1Q9BYQ7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
KRTAP4-1Q9BYQ7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC15.61■□□□□ 0.09
KRTAP4-1Q9BYQ7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC15.59■□□□□ 0.09
KRTAP4-1Q9BYQ7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
KRTAP4-1Q9BYQ7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRTAP4-1Q9BYQ7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
KRTAP4-1Q9BYQ7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP4-1Q9BYQ7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC15.54■□□□□ 0.08
KRTAP4-1Q9BYQ7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms