Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NOTCH4Q99466 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NOTCH4Q99466 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NOTCH4Q99466 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.63■■■□□ 2.49
NOTCH4Q99466 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.63■■■□□ 2.49
NOTCH4Q99466 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NOTCH4Q99466 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.54■■■□□ 2.48
NOTCH4Q99466 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.53■■■□□ 2.48
NOTCH4Q99466 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
NOTCH4Q99466 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.52■■■□□ 2.48
NOTCH4Q99466 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.51■■■□□ 2.47
NOTCH4Q99466 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NOTCH4Q99466 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NOTCH4Q99466 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.45■■■□□ 2.46
NOTCH4Q99466 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
NOTCH4Q99466 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.43■■■□□ 2.46
NOTCH4Q99466 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NOTCH4Q99466 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NOTCH4Q99466 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NOTCH4Q99466 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NOTCH4Q99466 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.34■■■□□ 2.45
NOTCH4Q99466 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.34■■■□□ 2.45
NOTCH4Q99466 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
NOTCH4Q99466 RARRES2P7-201ENST00000567349 469 ntBASIC30.31■■■□□ 2.44
NOTCH4Q99466 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
NOTCH4Q99466 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
NOTCH4Q99466 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NOTCH4Q99466 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
NOTCH4Q99466 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.25■■■□□ 2.43
NOTCH4Q99466 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.22■■■□□ 2.43
NOTCH4Q99466 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NOTCH4Q99466 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.22■■■□□ 2.43
NOTCH4Q99466 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
NOTCH4Q99466 AC136428.2-201ENST00000563187 214 ntBASIC30.15■■■□□ 2.42
NOTCH4Q99466 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
NOTCH4Q99466 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.13■■■□□ 2.41
NOTCH4Q99466 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.09■■■□□ 2.41
NOTCH4Q99466 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.08■■■□□ 2.41
NOTCH4Q99466 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.07■■■□□ 2.4
NOTCH4Q99466 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NOTCH4Q99466 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.06■■■□□ 2.4
NOTCH4Q99466 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.04■■■□□ 2.4
NOTCH4Q99466 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.02■■■□□ 2.4
NOTCH4Q99466 SETD8P1-201ENST00000623146 1180 ntBASIC30.01■■■□□ 2.4
NOTCH4Q99466 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NOTCH4Q99466 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30■■■□□ 2.39
NOTCH4Q99466 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NOTCH4Q99466 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30■■■□□ 2.39
NOTCH4Q99466 AC097358.2-201ENST00000607541 1159 ntBASIC29.99■■■□□ 2.39
NOTCH4Q99466 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.98■■■□□ 2.39
NOTCH4Q99466 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
NOTCH4Q99466 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NOTCH4Q99466 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NOTCH4Q99466 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.96■■■□□ 2.39
NOTCH4Q99466 SUZ12P1-203ENST00000578195 985 ntBASIC29.95■■■□□ 2.39
NOTCH4Q99466 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
NOTCH4Q99466 AC145285.7-201ENST00000614819 1539 ntBASIC29.95■■■□□ 2.38
NOTCH4Q99466 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
NOTCH4Q99466 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
NOTCH4Q99466 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.92■■■□□ 2.38
NOTCH4Q99466 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
NOTCH4Q99466 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.9■■■□□ 2.38
NOTCH4Q99466 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.9■■■□□ 2.38
NOTCH4Q99466 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NOTCH4Q99466 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.87■■■□□ 2.37
NOTCH4Q99466 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
NOTCH4Q99466 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.86■■■□□ 2.37
NOTCH4Q99466 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NOTCH4Q99466 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NOTCH4Q99466 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NOTCH4Q99466 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.76■■■□□ 2.35
NOTCH4Q99466 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.72■■■□□ 2.35
NOTCH4Q99466 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.35
NOTCH4Q99466 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.68■■■□□ 2.34
NOTCH4Q99466 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NOTCH4Q99466 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.67■■■□□ 2.34
NOTCH4Q99466 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NOTCH4Q99466 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NOTCH4Q99466 RPS2P35-201ENST00000443417 897 ntBASIC29.64■■■□□ 2.34
NOTCH4Q99466 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NOTCH4Q99466 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NOTCH4Q99466 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NOTCH4Q99466 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.55■■■□□ 2.32
NOTCH4Q99466 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NOTCH4Q99466 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NOTCH4Q99466 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
NOTCH4Q99466 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
NOTCH4Q99466 CAHM-201ENST00000604200 896 ntBASIC29.51■■■□□ 2.31
NOTCH4Q99466 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.48■■■□□ 2.31
NOTCH4Q99466 AL133380.1-201ENST00000506013 324 ntBASIC29.48■■■□□ 2.31
NOTCH4Q99466 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.48■■■□□ 2.31
NOTCH4Q99466 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NOTCH4Q99466 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NOTCH4Q99466 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
NOTCH4Q99466 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
NOTCH4Q99466 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
NOTCH4Q99466 AL391121.1-201ENST00000607967 1349 ntBASIC29.45■■■□□ 2.3
NOTCH4Q99466 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
NOTCH4Q99466 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.44■■■□□ 2.3
NOTCH4Q99466 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms