Protein–RNA interactions for Protein: Q8ND56

LSM14A, Protein LSM14 homolog A, humanhuman

Known RBP Predictions only

Length 463 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14AQ8ND56 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LSM14AQ8ND56 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
LSM14AQ8ND56 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.72■■■□□ 2.03
LSM14AQ8ND56 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.69■■■□□ 2.02
LSM14AQ8ND56 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
LSM14AQ8ND56 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LSM14AQ8ND56 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.64■■■□□ 2.02
LSM14AQ8ND56 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.63■■■□□ 2.01
LSM14AQ8ND56 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.63■■■□□ 2.01
LSM14AQ8ND56 AL031258.1-201ENST00000623562 325 ntBASIC27.63■■■□□ 2.01
LSM14AQ8ND56 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
LSM14AQ8ND56 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
LSM14AQ8ND56 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
LSM14AQ8ND56 RARRES2P7-201ENST00000567349 469 ntBASIC27.6■■■□□ 2.01
LSM14AQ8ND56 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
LSM14AQ8ND56 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LSM14AQ8ND56 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
LSM14AQ8ND56 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.54■■■□□ 2
LSM14AQ8ND56 RPS2P35-201ENST00000443417 897 ntBASIC27.51■■□□□ 1.99
LSM14AQ8ND56 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
LSM14AQ8ND56 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
LSM14AQ8ND56 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
LSM14AQ8ND56 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
LSM14AQ8ND56 AC097358.2-201ENST00000607541 1159 ntBASIC27.45■■□□□ 1.98
LSM14AQ8ND56 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
LSM14AQ8ND56 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
LSM14AQ8ND56 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.34■■□□□ 1.97
LSM14AQ8ND56 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.32■■□□□ 1.96
LSM14AQ8ND56 SUZ12P1-203ENST00000578195 985 ntBASIC27.29■■□□□ 1.96
LSM14AQ8ND56 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
LSM14AQ8ND56 AC136428.2-201ENST00000563187 214 ntBASIC27.27■■□□□ 1.96
LSM14AQ8ND56 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.27■■□□□ 1.96
LSM14AQ8ND56 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LSM14AQ8ND56 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.25■■□□□ 1.95
LSM14AQ8ND56 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
LSM14AQ8ND56 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.22■■□□□ 1.95
LSM14AQ8ND56 SETD8P1-201ENST00000623146 1180 ntBASIC27.21■■□□□ 1.95
LSM14AQ8ND56 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
LSM14AQ8ND56 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
LSM14AQ8ND56 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
LSM14AQ8ND56 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
LSM14AQ8ND56 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LSM14AQ8ND56 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LSM14AQ8ND56 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
LSM14AQ8ND56 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LSM14AQ8ND56 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
LSM14AQ8ND56 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.09■■□□□ 1.93
LSM14AQ8ND56 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LSM14AQ8ND56 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.06■■□□□ 1.92
LSM14AQ8ND56 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.05■■□□□ 1.92
LSM14AQ8ND56 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27■■□□□ 1.91
LSM14AQ8ND56 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.99■■□□□ 1.91
LSM14AQ8ND56 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LSM14AQ8ND56 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
LSM14AQ8ND56 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LSM14AQ8ND56 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LSM14AQ8ND56 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.96■■□□□ 1.91
LSM14AQ8ND56 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
LSM14AQ8ND56 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.95■■□□□ 1.91
LSM14AQ8ND56 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.91
LSM14AQ8ND56 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
LSM14AQ8ND56 AP006261.1-201ENST00000584783 668 ntBASIC26.94■■□□□ 1.9
LSM14AQ8ND56 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.94■■□□□ 1.9
LSM14AQ8ND56 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.92■■□□□ 1.9
LSM14AQ8ND56 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.91■■□□□ 1.9
LSM14AQ8ND56 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LSM14AQ8ND56 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LSM14AQ8ND56 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
LSM14AQ8ND56 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
LSM14AQ8ND56 AL162393.1-201ENST00000437852 946 ntBASIC26.86■■□□□ 1.89
LSM14AQ8ND56 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.86■■□□□ 1.89
LSM14AQ8ND56 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.85■■□□□ 1.89
LSM14AQ8ND56 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LSM14AQ8ND56 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LSM14AQ8ND56 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.83■■□□□ 1.89
LSM14AQ8ND56 MIR7108-201ENST00000614319 87 ntBASIC26.82■■□□□ 1.88
LSM14AQ8ND56 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
LSM14AQ8ND56 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.78■■□□□ 1.88
LSM14AQ8ND56 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LSM14AQ8ND56 ABHD17AP4-201ENST00000411545 909 ntBASIC26.75■■□□□ 1.87
LSM14AQ8ND56 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.75■■□□□ 1.87
LSM14AQ8ND56 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LSM14AQ8ND56 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.73■■□□□ 1.87
LSM14AQ8ND56 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.73■■□□□ 1.87
LSM14AQ8ND56 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LSM14AQ8ND56 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LSM14AQ8ND56 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
LSM14AQ8ND56 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
LSM14AQ8ND56 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
LSM14AQ8ND56 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.64■■□□□ 1.86
LSM14AQ8ND56 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.64■■□□□ 1.86
LSM14AQ8ND56 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LSM14AQ8ND56 CAHM-201ENST00000604200 896 ntBASIC26.62■■□□□ 1.85
LSM14AQ8ND56 HLA-V-202ENST00000446817 847 ntBASIC26.61■■□□□ 1.85
LSM14AQ8ND56 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.61■■□□□ 1.85
LSM14AQ8ND56 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.61■■□□□ 1.85
LSM14AQ8ND56 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LSM14AQ8ND56 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LSM14AQ8ND56 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LSM14AQ8ND56 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms