Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.04■□□□□ 0.32
UBR4Q5T4S7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC17.02■□□□□ 0.31
UBR4Q5T4S7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.01■□□□□ 0.31
UBR4Q5T4S7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBR4Q5T4S7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.01■□□□□ 0.31
UBR4Q5T4S7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.01■□□□□ 0.31
UBR4Q5T4S7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBR4Q5T4S7 AL162393.1-201ENST00000437852 946 ntBASIC16.99■□□□□ 0.31
UBR4Q5T4S7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.98■□□□□ 0.31
UBR4Q5T4S7 AL031258.1-201ENST00000623562 325 ntBASIC16.98■□□□□ 0.31
UBR4Q5T4S7 ABHD17AP4-201ENST00000411545 909 ntBASIC16.96■□□□□ 0.31
UBR4Q5T4S7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBR4Q5T4S7 MIR7108-201ENST00000614319 87 ntBASIC16.95■□□□□ 0.3
UBR4Q5T4S7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.94■□□□□ 0.3
UBR4Q5T4S7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBR4Q5T4S7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBR4Q5T4S7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBR4Q5T4S7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBR4Q5T4S7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBR4Q5T4S7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBR4Q5T4S7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBR4Q5T4S7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.84■□□□□ 0.29
UBR4Q5T4S7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.84■□□□□ 0.29
UBR4Q5T4S7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
UBR4Q5T4S7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBR4Q5T4S7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.82■□□□□ 0.28
UBR4Q5T4S7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC16.81■□□□□ 0.28
UBR4Q5T4S7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBR4Q5T4S7 SETD8P1-201ENST00000623146 1180 ntBASIC16.74■□□□□ 0.27
UBR4Q5T4S7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBR4Q5T4S7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBR4Q5T4S7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.7■□□□□ 0.26
UBR4Q5T4S7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC16.7■□□□□ 0.26
UBR4Q5T4S7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBR4Q5T4S7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC16.68■□□□□ 0.26
UBR4Q5T4S7 AP006261.1-201ENST00000584783 668 ntBASIC16.68■□□□□ 0.26
UBR4Q5T4S7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBR4Q5T4S7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.64■□□□□ 0.25
UBR4Q5T4S7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.63■□□□□ 0.25
UBR4Q5T4S7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBR4Q5T4S7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBR4Q5T4S7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBR4Q5T4S7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC16.56■□□□□ 0.24
UBR4Q5T4S7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
UBR4Q5T4S7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.56■□□□□ 0.24
UBR4Q5T4S7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBR4Q5T4S7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.56■□□□□ 0.24
UBR4Q5T4S7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBR4Q5T4S7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.55■□□□□ 0.24
UBR4Q5T4S7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBR4Q5T4S7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.55■□□□□ 0.24
UBR4Q5T4S7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.53■□□□□ 0.24
UBR4Q5T4S7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBR4Q5T4S7 HSD17B1P1-201ENST00000590052 955 ntBASIC16.53■□□□□ 0.24
UBR4Q5T4S7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBR4Q5T4S7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC16.52■□□□□ 0.24
UBR4Q5T4S7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBR4Q5T4S7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBR4Q5T4S7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBR4Q5T4S7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBR4Q5T4S7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBR4Q5T4S7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.49■□□□□ 0.23
UBR4Q5T4S7 MIR4449-201ENST00000578365 66 ntBASIC16.49■□□□□ 0.23
UBR4Q5T4S7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.49■□□□□ 0.23
UBR4Q5T4S7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBR4Q5T4S7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBR4Q5T4S7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBR4Q5T4S7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.46■□□□□ 0.22
UBR4Q5T4S7 CAHM-201ENST00000604200 896 ntBASIC16.45■□□□□ 0.22
UBR4Q5T4S7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBR4Q5T4S7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.44■□□□□ 0.22
UBR4Q5T4S7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.43■□□□□ 0.22
UBR4Q5T4S7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC16.42■□□□□ 0.22
UBR4Q5T4S7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
UBR4Q5T4S7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.4■□□□□ 0.22
UBR4Q5T4S7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.39■□□□□ 0.21
UBR4Q5T4S7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.39■□□□□ 0.21
UBR4Q5T4S7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC16.39■□□□□ 0.21
UBR4Q5T4S7 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.38■□□□□ 0.21
UBR4Q5T4S7 MIR3665-201ENST00000578708 105 ntBASIC16.37■□□□□ 0.21
UBR4Q5T4S7 AC019069.1-201ENST00000610008 1333 ntBASIC16.37■□□□□ 0.21
UBR4Q5T4S7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.36■□□□□ 0.21
UBR4Q5T4S7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
UBR4Q5T4S7 AL391121.1-201ENST00000607967 1349 ntBASIC16.36■□□□□ 0.21
UBR4Q5T4S7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBR4Q5T4S7 AC087741.3-201ENST00000624270 1347 ntBASIC16.35■□□□□ 0.21
UBR4Q5T4S7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC16.35■□□□□ 0.21
UBR4Q5T4S7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBR4Q5T4S7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.33■□□□□ 0.21
UBR4Q5T4S7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBR4Q5T4S7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBR4Q5T4S7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBR4Q5T4S7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UBR4Q5T4S7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.32■□□□□ 0.2
UBR4Q5T4S7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.32■□□□□ 0.2
UBR4Q5T4S7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBR4Q5T4S7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.31■□□□□ 0.2
UBR4Q5T4S7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC16.31■□□□□ 0.2
UBR4Q5T4S7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC16.31■□□□□ 0.2
UBR4Q5T4S7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms