Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM238LA0A1B0GVL6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM238LA0A1B0GVL6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM238LA0A1B0GVL6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM238LA0A1B0GVL6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM238LA0A1B0GVL6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TMEM238LA0A1B0GVL6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM238LA0A1B0GVL6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM238LA0A1B0GVL6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM238LA0A1B0GVL6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
TMEM238LA0A1B0GVL6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TMEM238LA0A1B0GVL6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM238LA0A1B0GVL6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TMEM238LA0A1B0GVL6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM238LA0A1B0GVL6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM238LA0A1B0GVL6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM238LA0A1B0GVL6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM238LA0A1B0GVL6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM238LA0A1B0GVL6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM238LA0A1B0GVL6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM238LA0A1B0GVL6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM238LA0A1B0GVL6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM238LA0A1B0GVL6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEM238LA0A1B0GVL6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM238LA0A1B0GVL6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM238LA0A1B0GVL6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TMEM238LA0A1B0GVL6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM238LA0A1B0GVL6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM238LA0A1B0GVL6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.02■□□□□ 0.8
TMEM238LA0A1B0GVL6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.02■□□□□ 0.79
TMEM238LA0A1B0GVL6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM238LA0A1B0GVL6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM238LA0A1B0GVL6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM238LA0A1B0GVL6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20■□□□□ 0.79
TMEM238LA0A1B0GVL6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM238LA0A1B0GVL6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TMEM238LA0A1B0GVL6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TMEM238LA0A1B0GVL6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
TMEM238LA0A1B0GVL6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM238LA0A1B0GVL6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM238LA0A1B0GVL6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM238LA0A1B0GVL6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM238LA0A1B0GVL6 AC135731.1-201ENST00000569415 2548 ntBASIC19.97■□□□□ 0.79
TMEM238LA0A1B0GVL6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM238LA0A1B0GVL6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM238LA0A1B0GVL6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM238LA0A1B0GVL6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM238LA0A1B0GVL6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TMEM238LA0A1B0GVL6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM238LA0A1B0GVL6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM238LA0A1B0GVL6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM238LA0A1B0GVL6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
TMEM238LA0A1B0GVL6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM238LA0A1B0GVL6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM238LA0A1B0GVL6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TMEM238LA0A1B0GVL6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM238LA0A1B0GVL6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM238LA0A1B0GVL6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TMEM238LA0A1B0GVL6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
TMEM238LA0A1B0GVL6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM238LA0A1B0GVL6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM238LA0A1B0GVL6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM238LA0A1B0GVL6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM238LA0A1B0GVL6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TMEM238LA0A1B0GVL6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM238LA0A1B0GVL6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TMEM238LA0A1B0GVL6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.83■□□□□ 0.76
TMEM238LA0A1B0GVL6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.83■□□□□ 0.76
TMEM238LA0A1B0GVL6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TMEM238LA0A1B0GVL6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TMEM238LA0A1B0GVL6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM238LA0A1B0GVL6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM238LA0A1B0GVL6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM238LA0A1B0GVL6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM238LA0A1B0GVL6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM238LA0A1B0GVL6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM238LA0A1B0GVL6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEM238LA0A1B0GVL6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM238LA0A1B0GVL6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM238LA0A1B0GVL6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM238LA0A1B0GVL6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM238LA0A1B0GVL6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM238LA0A1B0GVL6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM238LA0A1B0GVL6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM238LA0A1B0GVL6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM238LA0A1B0GVL6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM238LA0A1B0GVL6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM238LA0A1B0GVL6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM238LA0A1B0GVL6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM238LA0A1B0GVL6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM238LA0A1B0GVL6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM238LA0A1B0GVL6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM238LA0A1B0GVL6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM238LA0A1B0GVL6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TMEM238LA0A1B0GVL6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM238LA0A1B0GVL6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM238LA0A1B0GVL6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM238LA0A1B0GVL6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM238LA0A1B0GVL6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM238LA0A1B0GVL6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms