Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TMEM238LA0A1B0GVL6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM238LA0A1B0GVL6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TMEM238LA0A1B0GVL6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM238LA0A1B0GVL6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TMEM238LA0A1B0GVL6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.87■■□□□ 1.25
TMEM238LA0A1B0GVL6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TMEM238LA0A1B0GVL6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TMEM238LA0A1B0GVL6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.46■■□□□ 1.19
TMEM238LA0A1B0GVL6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM238LA0A1B0GVL6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM238LA0A1B0GVL6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
TMEM238LA0A1B0GVL6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMEM238LA0A1B0GVL6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMEM238LA0A1B0GVL6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TMEM238LA0A1B0GVL6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TMEM238LA0A1B0GVL6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.02■■□□□ 1.12
TMEM238LA0A1B0GVL6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TMEM238LA0A1B0GVL6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM238LA0A1B0GVL6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM238LA0A1B0GVL6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM238LA0A1B0GVL6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM238LA0A1B0GVL6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM238LA0A1B0GVL6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM238LA0A1B0GVL6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TMEM238LA0A1B0GVL6 AL161658.1-201ENST00000623641 1967 ntBASIC21.59■■□□□ 1.05
TMEM238LA0A1B0GVL6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM238LA0A1B0GVL6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
TMEM238LA0A1B0GVL6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM238LA0A1B0GVL6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM238LA0A1B0GVL6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
TMEM238LA0A1B0GVL6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TMEM238LA0A1B0GVL6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM238LA0A1B0GVL6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM238LA0A1B0GVL6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM238LA0A1B0GVL6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM238LA0A1B0GVL6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM238LA0A1B0GVL6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.27■■□□□ 1
TMEM238LA0A1B0GVL6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM238LA0A1B0GVL6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM238LA0A1B0GVL6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM238LA0A1B0GVL6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM238LA0A1B0GVL6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TMEM238LA0A1B0GVL6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
TMEM238LA0A1B0GVL6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM238LA0A1B0GVL6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM238LA0A1B0GVL6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TMEM238LA0A1B0GVL6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM238LA0A1B0GVL6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEM238LA0A1B0GVL6 AC139426.1-201ENST00000568218 2529 ntBASIC21.11■□□□□ 0.97
TMEM238LA0A1B0GVL6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM238LA0A1B0GVL6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.08■□□□□ 0.96
TMEM238LA0A1B0GVL6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM238LA0A1B0GVL6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM238LA0A1B0GVL6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21■□□□□ 0.95
TMEM238LA0A1B0GVL6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM238LA0A1B0GVL6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM238LA0A1B0GVL6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.94■□□□□ 0.94
TMEM238LA0A1B0GVL6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TMEM238LA0A1B0GVL6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM238LA0A1B0GVL6 AL356512.1-201ENST00000607453 1739 ntBASIC20.91■□□□□ 0.94
TMEM238LA0A1B0GVL6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM238LA0A1B0GVL6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TMEM238LA0A1B0GVL6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM238LA0A1B0GVL6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
TMEM238LA0A1B0GVL6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM238LA0A1B0GVL6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM238LA0A1B0GVL6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM238LA0A1B0GVL6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM238LA0A1B0GVL6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM238LA0A1B0GVL6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TMEM238LA0A1B0GVL6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM238LA0A1B0GVL6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM238LA0A1B0GVL6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM238LA0A1B0GVL6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM238LA0A1B0GVL6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM238LA0A1B0GVL6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM238LA0A1B0GVL6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM238LA0A1B0GVL6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM238LA0A1B0GVL6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM238LA0A1B0GVL6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TMEM238LA0A1B0GVL6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM238LA0A1B0GVL6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM238LA0A1B0GVL6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMEM238LA0A1B0GVL6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM238LA0A1B0GVL6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
TMEM238LA0A1B0GVL6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TMEM238LA0A1B0GVL6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM238LA0A1B0GVL6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM238LA0A1B0GVL6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM238LA0A1B0GVL6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM238LA0A1B0GVL6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM238LA0A1B0GVL6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM238LA0A1B0GVL6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM238LA0A1B0GVL6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM238LA0A1B0GVL6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TMEM238LA0A1B0GVL6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM238LA0A1B0GVL6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TMEM238LA0A1B0GVL6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TMEM238LA0A1B0GVL6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms