Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB5BP61020 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB5BP61020 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 AC011298.2-201ENST00000617989 482 ntBASIC12.54□□□□□ -0.4
RAB5BP61020 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
RAB5BP61020 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 AC090616.6-203ENST00000579186 1945 ntBASIC12.54□□□□□ -0.4
RAB5BP61020 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 AC092127.1-201ENST00000567093 3455 ntBASIC12.54□□□□□ -0.4
RAB5BP61020 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
RAB5BP61020 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB5BP61020 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB5BP61020 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 AC004911.1-201ENST00000416316 871 ntBASIC12.53□□□□□ -0.4
RAB5BP61020 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB5BP61020 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB5BP61020 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB5BP61020 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB5BP61020 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RAB5BP61020 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB5BP61020 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RAB5BP61020 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 AC019294.4-201ENST00000561777 2905 ntBASIC12.53□□□□□ -0.4
RAB5BP61020 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB5BP61020 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB5BP61020 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5BP61020 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5BP61020 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
RAB5BP61020 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
RAB5BP61020 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5BP61020 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
RAB5BP61020 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.52□□□□□ -0.4
RAB5BP61020 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
RAB5BP61020 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
RAB5BP61020 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.4
RAB5BP61020 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5BP61020 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.52□□□□□ -0.4
RAB5BP61020 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5BP61020 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
RAB5BP61020 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5BP61020 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5BP61020 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5BP61020 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5BP61020 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
RAB5BP61020 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB5BP61020 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB5BP61020 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 POU5F1P6-201ENST00000466990 990 ntBASIC12.52□□□□□ -0.41
RAB5BP61020 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB5BP61020 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms