RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
SSBP2-220ENST00000615665 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
SSBP2-220ENST00000615665 SHROOM4Q9ULL8 1493 aa24.21■■□□□ 1.47
SSBP2-220ENST00000615665 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
SSBP2-220ENST00000615665 CCDC180Q9P1Z9 1646 aa22.74■■□□□ 1.23
SSBP2-220ENST00000615665 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
SSBP2-220ENST00000615665 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
SSBP2-220ENST00000615665 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
SSBP2-220ENST00000615665 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
SSBP2-220ENST00000615665 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
SSBP2-220ENST00000615665 TRIM41Q8WV44 630 aa22.39■■□□□ 1.18
SSBP2-220ENST00000615665 ABCC9O60706 1549 aa22.2■■□□□ 1.14
SSBP2-220ENST00000615665 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
SSBP2-220ENST00000615665 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
SSBP2-220ENST00000615665 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
SSBP2-220ENST00000615665 HRCP23327 699 aa21.89■■□□□ 1.09
SSBP2-220ENST00000615665 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
SSBP2-220ENST00000615665 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
SSBP2-220ENST00000615665 TTBK1Q5TCY1 1321 aaPredicted RBP21.74■■□□□ 1.07
SSBP2-220ENST00000615665 APLP2Q06481 763 aa21.7■■□□□ 1.06
SSBP2-220ENST00000615665 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
SSBP2-220ENST00000615665 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
SSBP2-220ENST00000615665 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
SSBP2-220ENST00000615665 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
SSBP2-220ENST00000615665 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
SSBP2-220ENST00000615665 CCER1Q8TC90 406 aaPredicted RBP21.52■■□□□ 1.04
SSBP2-220ENST00000615665 NACADO15069 1562 aa21.49■■□□□ 1.03
SSBP2-220ENST00000615665 RANGAP1P46060 587 aaPredicted RBP21.49■■□□□ 1.03
SSBP2-220ENST00000615665 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
SSBP2-220ENST00000615665 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
SSBP2-220ENST00000615665 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
SSBP2-220ENST00000615665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.07■□□□□ 0.96
SSBP2-220ENST00000615665 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
SSBP2-220ENST00000615665 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
SSBP2-220ENST00000615665 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
SSBP2-220ENST00000615665 HNRNPUL2Q1KMD3 747 aaKnown RBP20.97■□□□□ 0.95
SSBP2-220ENST00000615665 CENPBP07199 599 aaPredicted RBP20.96■□□□□ 0.95
SSBP2-220ENST00000615665 WIZO95785 1651 aa20.83■□□□□ 0.93
SSBP2-220ENST00000615665 EEA1Q15075 1411 aa20.74■□□□□ 0.91
SSBP2-220ENST00000615665 ITGAEP38570 1179 aa20.73■□□□□ 0.91
SSBP2-220ENST00000615665 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
SSBP2-220ENST00000615665 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
SSBP2-220ENST00000615665 PELP1Q8IZL8 1130 aaKnown RBP20.68■□□□□ 0.9
SSBP2-220ENST00000615665 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
SSBP2-220ENST00000615665 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
SSBP2-220ENST00000615665 YTHDC1Q96MU7 727 aaKnown RBP20.67■□□□□ 0.9
SSBP2-220ENST00000615665 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
SSBP2-220ENST00000615665 CEP162Q5TB80 1403 aa20.66■□□□□ 0.9
SSBP2-220ENST00000615665 GOLGA3Q08378 1498 aa20.61■□□□□ 0.89
SSBP2-220ENST00000615665 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
SSBP2-220ENST00000615665 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
SSBP2-220ENST00000615665 SMARCA4P51532 1647 aa20.58■□□□□ 0.88
SSBP2-220ENST00000615665 SOGA1O94964 1423 aa20.56■□□□□ 0.88
SSBP2-220ENST00000615665 CLIP1P30622 1438 aa20.53■□□□□ 0.88
SSBP2-220ENST00000615665 CEP164Q9UPV0 1460 aa20.48■□□□□ 0.87
SSBP2-220ENST00000615665 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
SSBP2-220ENST00000615665 FAM50AQ14320 339 aaKnown RBP20.42■□□□□ 0.86
SSBP2-220ENST00000615665 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
SSBP2-220ENST00000615665 P3H3Q8IVL6 736 aa20.34■□□□□ 0.85
SSBP2-220ENST00000615665 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
SSBP2-220ENST00000615665 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
SSBP2-220ENST00000615665 RUSC2Q8N2Y8 1516 aa20.2■□□□□ 0.83
SSBP2-220ENST00000615665 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
SSBP2-220ENST00000615665 ACIN1Q9UKV3 1341 aaKnown RBP20.18■□□□□ 0.82
SSBP2-220ENST00000615665 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
SSBP2-220ENST00000615665 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.81
SSBP2-220ENST00000615665 ERICH6Q7L0X2 663 aa20.1■□□□□ 0.81
SSBP2-220ENST00000615665 NEFLP07196 543 aa20.09■□□□□ 0.81
SSBP2-220ENST00000615665 MYT1Q01538 1121 aa20.08■□□□□ 0.8
SSBP2-220ENST00000615665 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
SSBP2-220ENST00000615665 CUX2O14529 1486 aa20.03■□□□□ 0.8
SSBP2-220ENST00000615665 TRIM52Q96A61 297 aa20.02■□□□□ 0.8
SSBP2-220ENST00000615665 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
SSBP2-220ENST00000615665 BICRAQ9NZM4 1560 aa19.96■□□□□ 0.79
SSBP2-220ENST00000615665 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
SSBP2-220ENST00000615665 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
SSBP2-220ENST00000615665 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
SSBP2-220ENST00000615665 MTUS2Q5JR59 1369 aa19.9■□□□□ 0.78
SSBP2-220ENST00000615665 FBLN2P98095 1184 aa19.9■□□□□ 0.78
SSBP2-220ENST00000615665 MIER1Q8N108 512 aa19.89■□□□□ 0.78
SSBP2-220ENST00000615665 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
SSBP2-220ENST00000615665 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
SSBP2-220ENST00000615665 KANK4Q5T7N3 995 aaPredicted RBP19.88■□□□□ 0.77
SSBP2-220ENST00000615665 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
SSBP2-220ENST00000615665 CCNB3Q8WWL7 1395 aa19.86■□□□□ 0.77
SSBP2-220ENST00000615665 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
SSBP2-220ENST00000615665 POLR3GLQ9BT43 218 aa19.83■□□□□ 0.77
SSBP2-220ENST00000615665 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
SSBP2-220ENST00000615665 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.77
SSBP2-220ENST00000615665 ANP32CO43423 234 aa19.83■□□□□ 0.76
SSBP2-220ENST00000615665 KIF21BO75037 1637 aa19.82■□□□□ 0.76
SSBP2-220ENST00000615665 TONSLQ96HA7 1378 aa19.8■□□□□ 0.76
SSBP2-220ENST00000615665 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
SSBP2-220ENST00000615665 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
SSBP2-220ENST00000615665 CHIC2Q9UKJ5 165 aa19.72■□□□□ 0.75
SSBP2-220ENST00000615665 DDX10Q13206 875 aaKnown RBP19.71■□□□□ 0.75
SSBP2-220ENST00000615665 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
SSBP2-220ENST00000615665 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
SSBP2-220ENST00000615665 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
SSBP2-220ENST00000615665 CFTRP13569 1480 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms