RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.65
CACNA1C-211ENST00000399617 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
CACNA1C-211ENST00000399617 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
CACNA1C-211ENST00000399617 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.28
CACNA1C-211ENST00000399617 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
CACNA1C-211ENST00000399617 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
CACNA1C-211ENST00000399617 FAM9AQ8IZU1 332 aaPredicted RBP22.24■■□□□ 1.15
CACNA1C-211ENST00000399617 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
CACNA1C-211ENST00000399617 ATP1B4Q9UN42 357 aaPredicted RBP22.06■■□□□ 1.12
CACNA1C-211ENST00000399617 APLP2Q06481 763 aa22.02■■□□□ 1.12
CACNA1C-211ENST00000399617 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
CACNA1C-211ENST00000399617 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
CACNA1C-211ENST00000399617 PCGF6Q9BYE7 350 aa21.41■■□□□ 1.02
CACNA1C-211ENST00000399617 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
CACNA1C-211ENST00000399617 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
CACNA1C-211ENST00000399617 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
CACNA1C-211ENST00000399617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.23■□□□□ 0.99
CACNA1C-211ENST00000399617 HNRNPUL2Q1KMD3 747 aaKnown RBP21.23■□□□□ 0.99
CACNA1C-211ENST00000399617 PELP1Q8IZL8 1130 aaKnown RBP21.02■□□□□ 0.96
CACNA1C-211ENST00000399617 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
CACNA1C-211ENST00000399617 ITGAEP38570 1179 aa21■□□□□ 0.95
CACNA1C-211ENST00000399617 POLR3GLQ9BT43 218 aa20.98■□□□□ 0.95
CACNA1C-211ENST00000399617 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
CACNA1C-211ENST00000399617 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
CACNA1C-211ENST00000399617 YTHDC1Q96MU7 727 aaKnown RBP20.79■□□□□ 0.92
CACNA1C-211ENST00000399617 SLC4A1APQ9BWU0 796 aaKnown RBP20.78■□□□□ 0.92
CACNA1C-211ENST00000399617 ERICH6Q7L0X2 663 aa20.67■□□□□ 0.9
CACNA1C-211ENST00000399617 FBLN2P98095 1184 aa20.6■□□□□ 0.89
CACNA1C-211ENST00000399617 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
CACNA1C-211ENST00000399617 ABCC9O60706 1549 aa20.5■□□□□ 0.87
CACNA1C-211ENST00000399617 ARID3CA6NKF2 412 aa20.38■□□□□ 0.85
CACNA1C-211ENST00000399617 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
CACNA1C-211ENST00000399617 NEFLP07196 543 aa20.29■□□□□ 0.84
CACNA1C-211ENST00000399617 BCANQ96GW7 911 aa20.27■□□□□ 0.84
CACNA1C-211ENST00000399617 CENPBP07199 599 aaPredicted RBP20.27■□□□□ 0.83
CACNA1C-211ENST00000399617 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
CACNA1C-211ENST00000399617 SLC24A1O60721 1099 aa20.2■□□□□ 0.82
CACNA1C-211ENST00000399617 TRIM52Q96A61 297 aa20.17■□□□□ 0.82
CACNA1C-211ENST00000399617 BCL11AQ9H165 835 aa20.15■□□□□ 0.82
CACNA1C-211ENST00000399617 ZNF326Q5BKZ1 582 aaKnown RBP20.12■□□□□ 0.81
CACNA1C-211ENST00000399617 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.8
CACNA1C-211ENST00000399617 P3H3Q8IVL6 736 aa20.06■□□□□ 0.8
CACNA1C-211ENST00000399617 NEUROD1Q13562 356 aa20.02■□□□□ 0.79
CACNA1C-211ENST00000399617 MYT1Q01538 1121 aa19.95■□□□□ 0.78
CACNA1C-211ENST00000399617 DAXXQ9UER7 740 aaPredicted RBP19.92■□□□□ 0.78
CACNA1C-211ENST00000399617 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
CACNA1C-211ENST00000399617 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
CACNA1C-211ENST00000399617 CLSPNQ9HAW4 1339 aa19.81■□□□□ 0.76
CACNA1C-211ENST00000399617 PLEKHG5O94827 1062 aa19.81■□□□□ 0.76
CACNA1C-211ENST00000399617 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
CACNA1C-211ENST00000399617 ESF1Q9H501 851 aaKnown RBP19.77■□□□□ 0.75
CACNA1C-211ENST00000399617 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
CACNA1C-211ENST00000399617 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
CACNA1C-211ENST00000399617 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
CACNA1C-211ENST00000399617 A0A0G2JS52 829 aa19.65■□□□□ 0.74
CACNA1C-211ENST00000399617 NPM1P06748 294 aaKnown RBP eCLIP19.55■□□□□ 0.72
CACNA1C-211ENST00000399617 HRCP23327 699 aa19.55■□□□□ 0.72
CACNA1C-211ENST00000399617 ZBTB7CA1YPR0 619 aa19.49■□□□□ 0.71
CACNA1C-211ENST00000399617 ZNF316A6NFI3 1004 aaPredicted RBP19.48■□□□□ 0.71
CACNA1C-211ENST00000399617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.71
CACNA1C-211ENST00000399617 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
CACNA1C-211ENST00000399617 CANXP27824 592 aaKnown RBP19.43■□□□□ 0.7
CACNA1C-211ENST00000399617 NEFMP07197 916 aa19.35■□□□□ 0.69
CACNA1C-211ENST00000399617 CHIC2Q9UKJ5 165 aa19.31■□□□□ 0.68
CACNA1C-211ENST00000399617 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
CACNA1C-211ENST00000399617 C14orf37Q86TY3 774 aa19.28■□□□□ 0.68
CACNA1C-211ENST00000399617 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
CACNA1C-211ENST00000399617 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
CACNA1C-211ENST00000399617 SALL2Q9Y467 1007 aaPredicted RBP19.24■□□□□ 0.67
CACNA1C-211ENST00000399617 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
CACNA1C-211ENST00000399617 CHMP7Q8WUX9 453 aaPredicted RBP19.22■□□□□ 0.67
CACNA1C-211ENST00000399617 ANP32CO43423 234 aa19.21■□□□□ 0.67
CACNA1C-211ENST00000399617 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
CACNA1C-211ENST00000399617 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
CACNA1C-211ENST00000399617 KDM2AQ9Y2K7 1162 aa19.16■□□□□ 0.66
CACNA1C-211ENST00000399617 HAP1P54257 671 aaPredicted RBP19.09■□□□□ 0.65
CACNA1C-211ENST00000399617 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
CACNA1C-211ENST00000399617 ARXQ96QS3 562 aa19.05■□□□□ 0.64
CACNA1C-211ENST00000399617 PPP1R15AO75807 674 aaPredicted RBP19.04■□□□□ 0.64
CACNA1C-211ENST00000399617 RTL5Q5HYW3 569 aaPredicted RBP19.04■□□□□ 0.64
CACNA1C-211ENST00000399617 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
CACNA1C-211ENST00000399617 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
CACNA1C-211ENST00000399617 SENP3-EIF4A1A0A087X0R7 540 aa18.98■□□□□ 0.63
CACNA1C-211ENST00000399617 MLECQ14165 292 aa18.94■□□□□ 0.62
CACNA1C-211ENST00000399617 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
CACNA1C-211ENST00000399617 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
CACNA1C-211ENST00000399617 TSPY4P0CV99 314 aa18.86■□□□□ 0.61
CACNA1C-211ENST00000399617 TSPY10P0CW01 314 aa18.86■□□□□ 0.61
CACNA1C-211ENST00000399617 RGL3Q3MIN7 710 aa18.86■□□□□ 0.61
CACNA1C-211ENST00000399617 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
CACNA1C-211ENST00000399617 TMC1Q8TDI8 760 aa18.83■□□□□ 0.61
CACNA1C-211ENST00000399617 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
CACNA1C-211ENST00000399617 TULP1O00294 542 aaPredicted RBP18.8■□□□□ 0.6
CACNA1C-211ENST00000399617 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
CACNA1C-211ENST00000399617 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
CACNA1C-211ENST00000399617 DDX10Q13206 875 aaKnown RBP18.76■□□□□ 0.59
CACNA1C-211ENST00000399617 GTF3C3Q9Y5Q9 886 aa18.72■□□□□ 0.59
CACNA1C-211ENST00000399617 NPHP1O15259 732 aa18.72■□□□□ 0.59
CACNA1C-211ENST00000399617 SOX12O15370 315 aa18.71■□□□□ 0.59
CACNA1C-211ENST00000399617 TAOK2Q9UL54 1235 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms