Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 HLA-V-204ENST00000476601 1289 ntBASIC17.05■□□□□ 0.32
GCNT1Q02742 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.05■□□□□ 0.32
GCNT1Q02742 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.05■□□□□ 0.32
GCNT1Q02742 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.05■□□□□ 0.32
GCNT1Q02742 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.05■□□□□ 0.32
GCNT1Q02742 AL589739.1-201ENST00000607720 493 ntBASIC17.05■□□□□ 0.32
GCNT1Q02742 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.05■□□□□ 0.32
GCNT1Q02742 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.05■□□□□ 0.32
GCNT1Q02742 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.05■□□□□ 0.32
GCNT1Q02742 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 AC092850.2-201ENST00000623821 2697 ntBASIC17.05■□□□□ 0.32
GCNT1Q02742 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.05■□□□□ 0.32
GCNT1Q02742 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.05■□□□□ 0.32
GCNT1Q02742 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.05■□□□□ 0.32
GCNT1Q02742 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.05■□□□□ 0.32
GCNT1Q02742 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.05■□□□□ 0.32
GCNT1Q02742 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GCNT1Q02742 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GCNT1Q02742 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 TUBB3P1-201ENST00000405796 1332 ntBASIC17.04■□□□□ 0.32
GCNT1Q02742 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.04■□□□□ 0.32
GCNT1Q02742 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.04■□□□□ 0.32
GCNT1Q02742 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.04■□□□□ 0.32
GCNT1Q02742 AC051619.7-201ENST00000568314 623 ntBASIC17.04■□□□□ 0.32
GCNT1Q02742 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.04■□□□□ 0.32
GCNT1Q02742 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.04■□□□□ 0.32
GCNT1Q02742 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.04■□□□□ 0.32
GCNT1Q02742 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.04■□□□□ 0.32
GCNT1Q02742 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCNT1Q02742 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.03■□□□□ 0.32
GCNT1Q02742 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.03■□□□□ 0.32
GCNT1Q02742 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.03■□□□□ 0.32
GCNT1Q02742 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GCNT1Q02742 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.03■□□□□ 0.32
GCNT1Q02742 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.03■□□□□ 0.32
GCNT1Q02742 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GCNT1Q02742 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.03■□□□□ 0.32
GCNT1Q02742 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GCNT1Q02742 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GCNT1Q02742 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.03■□□□□ 0.32
GCNT1Q02742 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.03■□□□□ 0.32
GCNT1Q02742 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCNT1Q02742 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms