Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01554Q52M75 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 AC010969.2-201ENST00000602458 3231 ntBASIC8.15□□□□□ -1.11
LINC01554Q52M75 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 AC087164.2-201ENST00000624514 3130 ntBASIC8.15□□□□□ -1.11
LINC01554Q52M75 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 AC009093.2-202ENST00000620513 2079 ntBASIC8.15□□□□□ -1.11
LINC01554Q52M75 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01554Q52M75 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
LINC01554Q52M75 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 AC079776.2-201ENST00000641154 1609 ntBASIC8.14□□□□□ -1.11
LINC01554Q52M75 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 PPT1-213ENST00000641319 2388 ntBASIC8.14□□□□□ -1.11
LINC01554Q52M75 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 VENTXP1-201ENST00000569334 2716 ntBASIC8.14□□□□□ -1.11
LINC01554Q52M75 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 SDHAP2-201ENST00000455183 2001 ntBASIC8.14□□□□□ -1.11
LINC01554Q52M75 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 RPPH1-201ENST00000516869 333 ntBASIC8.14□□□□□ -1.11
LINC01554Q52M75 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 CD177P1-201ENST00000606252 935 ntBASIC8.14□□□□□ -1.11
LINC01554Q52M75 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
LINC01554Q52M75 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01554Q52M75 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 329.3 ms