RNA–Protein interactions for RNA: ENST00000366917.5

MARK1-201, Transcript of microtubule affinity regulating kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MARK1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK1-201ENST00000366917 NISCHQ9Y2I1 1504 aa26.42■■□□□ 1.82
MARK1-201ENST00000366917 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
MARK1-201ENST00000366917 SUPT5HO00267 1087 aaKnown RBP23.6■■□□□ 1.37
MARK1-201ENST00000366917 HRCP23327 699 aa23.57■■□□□ 1.36
MARK1-201ENST00000366917 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
MARK1-201ENST00000366917 PCGF6Q9BYE7 350 aa23.3■■□□□ 1.32
MARK1-201ENST00000366917 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
MARK1-201ENST00000366917 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
MARK1-201ENST00000366917 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
MARK1-201ENST00000366917 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
MARK1-201ENST00000366917 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
MARK1-201ENST00000366917 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
MARK1-201ENST00000366917 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
MARK1-201ENST00000366917 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
MARK1-201ENST00000366917 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.17
MARK1-201ENST00000366917 CCDC180Q9P1Z9 1646 aa22.15■■□□□ 1.14
MARK1-201ENST00000366917 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
MARK1-201ENST00000366917 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
MARK1-201ENST00000366917 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
MARK1-201ENST00000366917 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
MARK1-201ENST00000366917 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
MARK1-201ENST00000366917 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
MARK1-201ENST00000366917 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
MARK1-201ENST00000366917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.64■■□□□ 1.06
MARK1-201ENST00000366917 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
MARK1-201ENST00000366917 DIEXFQ68CQ4 756 aaKnown RBP21.47■■□□□ 1.03
MARK1-201ENST00000366917 CENPBP07199 599 aaPredicted RBP21.46■■□□□ 1.03
MARK1-201ENST00000366917 MYT1Q01538 1121 aa21.42■■□□□ 1.02
MARK1-201ENST00000366917 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
MARK1-201ENST00000366917 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1
MARK1-201ENST00000366917 ABCC9O60706 1549 aa21.32■■□□□ 1
MARK1-201ENST00000366917 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
MARK1-201ENST00000366917 RB1CC1Q8TDY2 1594 aa21.27■■□□□ 1
MARK1-201ENST00000366917 SCRIBQ14160 1630 aa21.09■□□□□ 0.97
MARK1-201ENST00000366917 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
MARK1-201ENST00000366917 MIER1Q8N108 512 aa20.97■□□□□ 0.95
MARK1-201ENST00000366917 CECR2Q9BXF3 1484 aa20.83■□□□□ 0.92
MARK1-201ENST00000366917 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
MARK1-201ENST00000366917 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
MARK1-201ENST00000366917 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
MARK1-201ENST00000366917 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
MARK1-201ENST00000366917 UBTFP17480 764 aaKnown RBP20.67■□□□□ 0.9
MARK1-201ENST00000366917 WIZO95785 1651 aa20.66■□□□□ 0.9
MARK1-201ENST00000366917 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
MARK1-201ENST00000366917 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
MARK1-201ENST00000366917 SOGA1O94964 1423 aa20.58■□□□□ 0.88
MARK1-201ENST00000366917 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
MARK1-201ENST00000366917 TNIKQ9UKE5 1360 aa20.52■□□□□ 0.87
MARK1-201ENST00000366917 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
MARK1-201ENST00000366917 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
MARK1-201ENST00000366917 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
MARK1-201ENST00000366917 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
MARK1-201ENST00000366917 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
MARK1-201ENST00000366917 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
MARK1-201ENST00000366917 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
MARK1-201ENST00000366917 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
MARK1-201ENST00000366917 BCANQ96GW7 911 aa20.36■□□□□ 0.85
MARK1-201ENST00000366917 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
MARK1-201ENST00000366917 APLP2Q06481 763 aa20.28■□□□□ 0.84
MARK1-201ENST00000366917 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
MARK1-201ENST00000366917 KCNH8Q96L42 1107 aa20.25■□□□□ 0.83
MARK1-201ENST00000366917 NACADO15069 1562 aa20.22■□□□□ 0.83
MARK1-201ENST00000366917 CLIP1P30622 1438 aa20.2■□□□□ 0.82
MARK1-201ENST00000366917 EEA1Q15075 1411 aa20.19■□□□□ 0.82
MARK1-201ENST00000366917 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
MARK1-201ENST00000366917 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
MARK1-201ENST00000366917 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
MARK1-201ENST00000366917 FKBP8Q14318 412 aa20.13■□□□□ 0.81
MARK1-201ENST00000366917 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
MARK1-201ENST00000366917 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
MARK1-201ENST00000366917 ITGAEP38570 1179 aa20.03■□□□□ 0.8
MARK1-201ENST00000366917 RBM19Q9Y4C8 960 aaKnown RBP19.99■□□□□ 0.79
MARK1-201ENST00000366917 RAPGEF2Q9Y4G8 1499 aa19.98■□□□□ 0.79
MARK1-201ENST00000366917 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
MARK1-201ENST00000366917 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
MARK1-201ENST00000366917 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
MARK1-201ENST00000366917 KIF21BO75037 1637 aa19.92■□□□□ 0.78
MARK1-201ENST00000366917 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
MARK1-201ENST00000366917 NEFLP07196 543 aa19.9■□□□□ 0.78
MARK1-201ENST00000366917 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
MARK1-201ENST00000366917 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
MARK1-201ENST00000366917 MSH5O43196 834 aa19.83■□□□□ 0.76
MARK1-201ENST00000366917 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
MARK1-201ENST00000366917 SIN3AQ96ST3 1273 aa19.75■□□□□ 0.75
MARK1-201ENST00000366917 IRX6P78412 446 aaPredicted RBP19.73■□□□□ 0.75
MARK1-201ENST00000366917 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
MARK1-201ENST00000366917 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
MARK1-201ENST00000366917 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
MARK1-201ENST00000366917 RAB3GAP2Q9H2M9 1393 aa19.7■□□□□ 0.74
MARK1-201ENST00000366917 ERICH6Q7L0X2 663 aa19.69■□□□□ 0.74
MARK1-201ENST00000366917 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
MARK1-201ENST00000366917 PPP1R15AO75807 674 aaPredicted RBP19.65■□□□□ 0.74
MARK1-201ENST00000366917 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
MARK1-201ENST00000366917 MAPKBP1O60336 1514 aa19.64■□□□□ 0.73
MARK1-201ENST00000366917 ANP32CO43423 234 aa19.64■□□□□ 0.73
MARK1-201ENST00000366917 CUX2O14529 1486 aa19.59■□□□□ 0.73
MARK1-201ENST00000366917 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
MARK1-201ENST00000366917 FAM50AQ14320 339 aaKnown RBP19.55■□□□□ 0.72
MARK1-201ENST00000366917 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
MARK1-201ENST00000366917 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms