RNA–Protein interactions for RNA: ENST00000242159.4

HOXA7-201, Transcript of homeobox A7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA7, Length 2,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA7-201ENST00000242159 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
HOXA7-201ENST00000242159 HRCP23327 699 aa22.47■■□□□ 1.19
HOXA7-201ENST00000242159 PELP1Q8IZL8 1130 aaKnown RBP22.26■■□□□ 1.15
HOXA7-201ENST00000242159 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
HOXA7-201ENST00000242159 PCGF6Q9BYE7 350 aa21.68■■□□□ 1.06
HOXA7-201ENST00000242159 MYO15BQ96JP2 1530 aa21.61■■□□□ 1.05
HOXA7-201ENST00000242159 PPARGC1BQ86YN6 1023 aaKnown RBP21.61■■□□□ 1.05
HOXA7-201ENST00000242159 MYT1Q01538 1121 aa21.59■■□□□ 1.05
HOXA7-201ENST00000242159 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
HOXA7-201ENST00000242159 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
HOXA7-201ENST00000242159 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
HOXA7-201ENST00000242159 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
HOXA7-201ENST00000242159 ZCCHC6Q5VYS8 1495 aaKnown RBP21.48■■□□□ 1.03
HOXA7-201ENST00000242159 ZEB1P37275 1124 aaPredicted RBP21.31■■□□□ 1
HOXA7-201ENST00000242159 TRIM26Q12899 539 aaPredicted RBP21.22■□□□□ 0.99
HOXA7-201ENST00000242159 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
HOXA7-201ENST00000242159 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
HOXA7-201ENST00000242159 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
HOXA7-201ENST00000242159 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
HOXA7-201ENST00000242159 ABCC9O60706 1549 aa20.66■□□□□ 0.9
HOXA7-201ENST00000242159 CENPBP07199 599 aaPredicted RBP20.6■□□□□ 0.89
HOXA7-201ENST00000242159 NACADO15069 1562 aa20.55■□□□□ 0.88
HOXA7-201ENST00000242159 NEUROD1Q13562 356 aa20.54■□□□□ 0.88
HOXA7-201ENST00000242159 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
HOXA7-201ENST00000242159 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
HOXA7-201ENST00000242159 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
HOXA7-201ENST00000242159 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
HOXA7-201ENST00000242159 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
HOXA7-201ENST00000242159 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
HOXA7-201ENST00000242159 CCER1Q8TC90 406 aaPredicted RBP20.12■□□□□ 0.81
HOXA7-201ENST00000242159 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
HOXA7-201ENST00000242159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
HOXA7-201ENST00000242159 CLSPNQ9HAW4 1339 aa19.95■□□□□ 0.78
HOXA7-201ENST00000242159 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
HOXA7-201ENST00000242159 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
HOXA7-201ENST00000242159 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
HOXA7-201ENST00000242159 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
HOXA7-201ENST00000242159 FAM9AQ8IZU1 332 aaPredicted RBP19.81■□□□□ 0.76
HOXA7-201ENST00000242159 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
HOXA7-201ENST00000242159 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
HOXA7-201ENST00000242159 MROH2BQ7Z745 1585 aa19.72■□□□□ 0.75
HOXA7-201ENST00000242159 ANP32EQ9BTT0 268 aa19.71■□□□□ 0.75
HOXA7-201ENST00000242159 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.74
HOXA7-201ENST00000242159 YTHDC1Q96MU7 727 aaKnown RBP19.7■□□□□ 0.74
HOXA7-201ENST00000242159 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
HOXA7-201ENST00000242159 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
HOXA7-201ENST00000242159 MIER1Q8N108 512 aa19.64■□□□□ 0.73
HOXA7-201ENST00000242159 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
HOXA7-201ENST00000242159 WIZO95785 1651 aa19.57■□□□□ 0.72
HOXA7-201ENST00000242159 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
HOXA7-201ENST00000242159 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
HOXA7-201ENST00000242159 SUPT16HQ9Y5B9 1047 aaKnown RBP19.52■□□□□ 0.72
HOXA7-201ENST00000242159 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
HOXA7-201ENST00000242159 TSHZ2Q9NRE2 1034 aa19.47■□□□□ 0.71
HOXA7-201ENST00000242159 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
HOXA7-201ENST00000242159 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
HOXA7-201ENST00000242159 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
HOXA7-201ENST00000242159 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
HOXA7-201ENST00000242159 EEA1Q15075 1411 aa19.32■□□□□ 0.68
HOXA7-201ENST00000242159 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
HOXA7-201ENST00000242159 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
HOXA7-201ENST00000242159 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
HOXA7-201ENST00000242159 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
HOXA7-201ENST00000242159 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
HOXA7-201ENST00000242159 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
HOXA7-201ENST00000242159 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
HOXA7-201ENST00000242159 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
HOXA7-201ENST00000242159 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
HOXA7-201ENST00000242159 MYT1LQ9UL68 1186 aa19.03■□□□□ 0.64
HOXA7-201ENST00000242159 SOGA1O94964 1423 aa19.02■□□□□ 0.64
HOXA7-201ENST00000242159 RBM19Q9Y4C8 960 aaKnown RBP19.01■□□□□ 0.63
HOXA7-201ENST00000242159 UBTFP17480 764 aaKnown RBP19■□□□□ 0.63
HOXA7-201ENST00000242159 VPS8Q8N3P4 1428 aa18.98■□□□□ 0.63
HOXA7-201ENST00000242159 DHX57Q6P158 1386 aaKnown RBP18.97■□□□□ 0.63
HOXA7-201ENST00000242159 KIF21BO75037 1637 aa18.97■□□□□ 0.63
HOXA7-201ENST00000242159 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
HOXA7-201ENST00000242159 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
HOXA7-201ENST00000242159 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
HOXA7-201ENST00000242159 PRKCSHP14314 528 aaPredicted RBP18.94■□□□□ 0.62
HOXA7-201ENST00000242159 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
HOXA7-201ENST00000242159 NEFLP07196 543 aa18.92■□□□□ 0.62
HOXA7-201ENST00000242159 FKBP8Q14318 412 aa18.9■□□□□ 0.62
HOXA7-201ENST00000242159 FANCIQ9NVI1 1328 aa18.9■□□□□ 0.62
HOXA7-201ENST00000242159 CLIP1P30622 1438 aa18.89■□□□□ 0.62
HOXA7-201ENST00000242159 APLP2Q06481 763 aa18.88■□□□□ 0.61
HOXA7-201ENST00000242159 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.6
HOXA7-201ENST00000242159 CUX2O14529 1486 aa18.83■□□□□ 0.6
HOXA7-201ENST00000242159 BCANQ96GW7 911 aa18.82■□□□□ 0.6
HOXA7-201ENST00000242159 MSH5O43196 834 aa18.77■□□□□ 0.6
HOXA7-201ENST00000242159 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
HOXA7-201ENST00000242159 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
HOXA7-201ENST00000242159 RRBP1Q9P2E9 1410 aaKnown RBP18.7■□□□□ 0.58
HOXA7-201ENST00000242159 KCNH8Q96L42 1107 aa18.67■□□□□ 0.58
HOXA7-201ENST00000242159 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
HOXA7-201ENST00000242159 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
HOXA7-201ENST00000242159 ERICH6BQ5W0A0 696 aa18.62■□□□□ 0.57
HOXA7-201ENST00000242159 CFTRP13569 1480 aa18.61■□□□□ 0.57
HOXA7-201ENST00000242159 DEKP35659 375 aaKnown RBP18.58■□□□□ 0.56
HOXA7-201ENST00000242159 ITGAEP38570 1179 aa18.56■□□□□ 0.56
HOXA7-201ENST00000242159 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms