RNA–Protein interactions for RNA: ENST00000265175.5

SEC24B-201, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC24B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-201ENST00000265175 DCAF8L2P0C7V8 631 aa21.09■□□□□ 0.97
SEC24B-201ENST00000265175 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
SEC24B-201ENST00000265175 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
SEC24B-201ENST00000265175 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
SEC24B-201ENST00000265175 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
SEC24B-201ENST00000265175 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.8
SEC24B-201ENST00000265175 CENPBP07199 599 aaPredicted RBP19.83■□□□□ 0.77
SEC24B-201ENST00000265175 MYT1Q01538 1121 aa19.82■□□□□ 0.76
SEC24B-201ENST00000265175 NISCHQ9Y2I1 1504 aa19.63■□□□□ 0.73
SEC24B-201ENST00000265175 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
SEC24B-201ENST00000265175 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
SEC24B-201ENST00000265175 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
SEC24B-201ENST00000265175 APLP2Q06481 763 aa19.55■□□□□ 0.72
SEC24B-201ENST00000265175 TTBK1Q5TCY1 1321 aaPredicted RBP19.51■□□□□ 0.71
SEC24B-201ENST00000265175 CCER1Q8TC90 406 aaPredicted RBP19.45■□□□□ 0.7
SEC24B-201ENST00000265175 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
SEC24B-201ENST00000265175 HRCP23327 699 aa19.26■□□□□ 0.67
SEC24B-201ENST00000265175 NEFLP07196 543 aa19.18■□□□□ 0.66
SEC24B-201ENST00000265175 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
SEC24B-201ENST00000265175 TRIM26Q12899 539 aaPredicted RBP18.97■□□□□ 0.63
SEC24B-201ENST00000265175 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
SEC24B-201ENST00000265175 PPARGC1BQ86YN6 1023 aaKnown RBP18.92■□□□□ 0.62
SEC24B-201ENST00000265175 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
SEC24B-201ENST00000265175 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
SEC24B-201ENST00000265175 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
SEC24B-201ENST00000265175 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
SEC24B-201ENST00000265175 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
SEC24B-201ENST00000265175 GTF3C3Q9Y5Q9 886 aa18.53■□□□□ 0.56
SEC24B-201ENST00000265175 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.55
SEC24B-201ENST00000265175 RTL5Q5HYW3 569 aaPredicted RBP18.45■□□□□ 0.54
SEC24B-201ENST00000265175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
SEC24B-201ENST00000265175 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
SEC24B-201ENST00000265175 ITGAEP38570 1179 aa18.35■□□□□ 0.53
SEC24B-201ENST00000265175 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
SEC24B-201ENST00000265175 BCANQ96GW7 911 aa18.27■□□□□ 0.51
SEC24B-201ENST00000265175 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
SEC24B-201ENST00000265175 ACIN1Q9UKV3 1341 aaKnown RBP18.23■□□□□ 0.51
SEC24B-201ENST00000265175 ZNF316A6NFI3 1004 aaPredicted RBP18.14■□□□□ 0.5
SEC24B-201ENST00000265175 CLSPNQ9HAW4 1339 aa18.06■□□□□ 0.48
SEC24B-201ENST00000265175 CDK11AQ9UQ88 783 aaPredicted RBP18.05■□□□□ 0.48
SEC24B-201ENST00000265175 EIF5BO60841 1220 aaKnown RBP17.87■□□□□ 0.45
SEC24B-201ENST00000265175 ANP32CO43423 234 aa17.86■□□□□ 0.45
SEC24B-201ENST00000265175 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
SEC24B-201ENST00000265175 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
SEC24B-201ENST00000265175 ANP32AP39687 249 aaKnown RBP17.75■□□□□ 0.43
SEC24B-201ENST00000265175 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
SEC24B-201ENST00000265175 FKBP8Q14318 412 aa17.71■□□□□ 0.43
SEC24B-201ENST00000265175 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
SEC24B-201ENST00000265175 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
SEC24B-201ENST00000265175 MYT1LQ9UL68 1186 aa17.63■□□□□ 0.41
SEC24B-201ENST00000265175 TRIM52Q96A61 297 aa17.61■□□□□ 0.41
SEC24B-201ENST00000265175 NBR1Q14596 966 aa17.53■□□□□ 0.4
SEC24B-201ENST00000265175 GLIPR1L2Q4G1C9 344 aa17.53■□□□□ 0.4
SEC24B-201ENST00000265175 ZNF326Q5BKZ1 582 aaKnown RBP17.52■□□□□ 0.39
SEC24B-201ENST00000265175 HNRNPUQ00839 825 aaKnown RBP eCLIP17.45■□□□□ 0.38
SEC24B-201ENST00000265175 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
SEC24B-201ENST00000265175 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
SEC24B-201ENST00000265175 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
SEC24B-201ENST00000265175 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
SEC24B-201ENST00000265175 MIER1Q8N108 512 aa17.4■□□□□ 0.38
SEC24B-201ENST00000265175 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.37
SEC24B-201ENST00000265175 ANP32BQ92688 251 aaKnown RBP17.35■□□□□ 0.37
SEC24B-201ENST00000265175 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.36
SEC24B-201ENST00000265175 CCDC136Q96JN2 1154 aa17.32■□□□□ 0.36
SEC24B-201ENST00000265175 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
SEC24B-201ENST00000265175 ARXQ96QS3 562 aa17.26■□□□□ 0.35
SEC24B-201ENST00000265175 IRX6P78412 446 aaPredicted RBP17.26■□□□□ 0.35
SEC24B-201ENST00000265175 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
SEC24B-201ENST00000265175 HSP90AA1P07900 732 aaKnown RBP17.25■□□□□ 0.35
SEC24B-201ENST00000265175 UPF2Q9HAU5 1272 aaKnown RBP17.22■□□□□ 0.35
SEC24B-201ENST00000265175 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
SEC24B-201ENST00000265175 TONSLQ96HA7 1378 aa17.16■□□□□ 0.34
SEC24B-201ENST00000265175 MRS2Q9HD23 443 aa17.1■□□□□ 0.33
SEC24B-201ENST00000265175 P3H3Q8IVL6 736 aa17.09■□□□□ 0.33
SEC24B-201ENST00000265175 NEFMP07197 916 aa17.09■□□□□ 0.33
SEC24B-201ENST00000265175 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
SEC24B-201ENST00000265175 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.32
SEC24B-201ENST00000265175 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
SEC24B-201ENST00000265175 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.03■□□□□ 0.32
SEC24B-201ENST00000265175 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
SEC24B-201ENST00000265175 ERICH6BQ5W0A0 696 aa16.99■□□□□ 0.31
SEC24B-201ENST00000265175 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
SEC24B-201ENST00000265175 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
SEC24B-201ENST00000265175 TRIM44Q96DX7 344 aaPredicted RBP16.96■□□□□ 0.31
SEC24B-201ENST00000265175 DDRGK1Q96HY6 314 aa16.94■□□□□ 0.3
SEC24B-201ENST00000265175 PPM1GO15355 546 aaPredicted RBP16.93■□□□□ 0.3
SEC24B-201ENST00000265175 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
SEC24B-201ENST00000265175 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
SEC24B-201ENST00000265175 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
SEC24B-201ENST00000265175 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
SEC24B-201ENST00000265175 BECN1Q14457 450 aa16.88■□□□□ 0.29
SEC24B-201ENST00000265175 NAP1L5Q96NT1 182 aaPredicted RBP16.86■□□□□ 0.29
SEC24B-201ENST00000265175 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEC24B-201ENST00000265175 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
SEC24B-201ENST00000265175 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
SEC24B-201ENST00000265175 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.29
SEC24B-201ENST00000265175 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
SEC24B-201ENST00000265175 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
SEC24B-201ENST00000265175 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
SEC24B-201ENST00000265175 EIF4G2P78344 907 aaKnown RBP eCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms