RNA–Protein interactions for RNA: ENST00000246041.6

AP5S1-201, Transcript of adaptor related protein complex 5 subunit sigma 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene AP5S1, Length 1,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP5S1-201ENST00000246041 NISCHQ9Y2I1 1504 aa42.13■■■■■ 4.34
AP5S1-201ENST00000246041 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
AP5S1-201ENST00000246041 ABCC9O60706 1549 aa35.54■■■■□ 3.28
AP5S1-201ENST00000246041 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
AP5S1-201ENST00000246041 DCAF8L2P0C7V8 631 aa35.07■■■■□ 3.21
AP5S1-201ENST00000246041 DCAF1Q9Y4B6 1507 aa34.81■■■■□ 3.16
AP5S1-201ENST00000246041 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
AP5S1-201ENST00000246041 NACADO15069 1562 aa34.6■■■■□ 3.13
AP5S1-201ENST00000246041 RB1CC1Q8TDY2 1594 aa34.43■■■■□ 3.1
AP5S1-201ENST00000246041 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
AP5S1-201ENST00000246041 SCRIBQ14160 1630 aa33.95■■■■□ 3.02
AP5S1-201ENST00000246041 UNC13AQ9UPW8 1703 aa33.64■■■□□ 2.98
AP5S1-201ENST00000246041 PABPN1Q86U42 306 aaKnown RBP eCLIP33.43■■■□□ 2.94
AP5S1-201ENST00000246041 BICRAQ9NZM4 1560 aa33.39■■■□□ 2.94
AP5S1-201ENST00000246041 CECR2Q9BXF3 1484 aa32.8■■■□□ 2.84
AP5S1-201ENST00000246041 BAZ1AQ9NRL2 1556 aaPredicted RBP32.57■■■□□ 2.81
AP5S1-201ENST00000246041 MROH2BQ7Z745 1585 aa32.53■■■□□ 2.8
AP5S1-201ENST00000246041 SMARCA4P51532 1647 aa32.49■■■□□ 2.79
AP5S1-201ENST00000246041 RSF1Q96T23 1441 aaPredicted RBP32.49■■■□□ 2.79
AP5S1-201ENST00000246041 SUPT5HO00267 1087 aaKnown RBP32.46■■■□□ 2.79
AP5S1-201ENST00000246041 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.79
AP5S1-201ENST00000246041 WIZO95785 1651 aa32.21■■■□□ 2.75
AP5S1-201ENST00000246041 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
AP5S1-201ENST00000246041 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
AP5S1-201ENST00000246041 CC2D2AQ9P2K1 1620 aa32.11■■■□□ 2.73
AP5S1-201ENST00000246041 SMARCA2P51531 1590 aa32.09■■■□□ 2.73
AP5S1-201ENST00000246041 NCAPD3P42695 1498 aa31.95■■■□□ 2.71
AP5S1-201ENST00000246041 BAZ1BQ9UIG0 1483 aaKnown RBP31.93■■■□□ 2.7
AP5S1-201ENST00000246041 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
AP5S1-201ENST00000246041 TOP2AP11388 1531 aaKnown RBP31.87■■■□□ 2.69
AP5S1-201ENST00000246041 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
AP5S1-201ENST00000246041 CCDC88BA6NC98 1476 aa31.56■■■□□ 2.64
AP5S1-201ENST00000246041 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
AP5S1-201ENST00000246041 CFTRP13569 1480 aa31.09■■■□□ 2.57
AP5S1-201ENST00000246041 NESP48681 1621 aa31.01■■■□□ 2.55
AP5S1-201ENST00000246041 LAMC3Q9Y6N6 1575 aa30.93■■■□□ 2.54
AP5S1-201ENST00000246041 PRDM2Q13029 1718 aa30.78■■■□□ 2.52
AP5S1-201ENST00000246041 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
AP5S1-201ENST00000246041 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
AP5S1-201ENST00000246041 CHIC1Q5VXU3 224 aa30.74■■■□□ 2.51
AP5S1-201ENST00000246041 ABCC8Q09428 1581 aa30.7■■■□□ 2.51
AP5S1-201ENST00000246041 CEP164Q9UPV0 1460 aa30.61■■■□□ 2.49
AP5S1-201ENST00000246041 WRNQ14191 1432 aaPredicted RBP eCLIP30.6■■■□□ 2.49
AP5S1-201ENST00000246041 KIF21AQ7Z4S6 1674 aa30.58■■■□□ 2.49
AP5S1-201ENST00000246041 TRIM41Q8WV44 630 aa30.56■■■□□ 2.48
AP5S1-201ENST00000246041 ERCC6Q03468 1493 aa30.54■■■□□ 2.48
AP5S1-201ENST00000246041 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
AP5S1-201ENST00000246041 CUX1P39880 1505 aa30.46■■■□□ 2.47
AP5S1-201ENST00000246041 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.46
AP5S1-201ENST00000246041 MRC2Q9UBG0 1479 aa30.37■■■□□ 2.45
AP5S1-201ENST00000246041 TOP2BQ02880 1626 aa30.37■■■□□ 2.45
AP5S1-201ENST00000246041 TOPBP1Q92547 1522 aa30.35■■■□□ 2.45
AP5S1-201ENST00000246041 DNMBPQ6XZF7 1577 aa30.34■■■□□ 2.45
AP5S1-201ENST00000246041 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
AP5S1-201ENST00000246041 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
AP5S1-201ENST00000246041 FGD5Q6ZNL6 1462 aa30.22■■■□□ 2.43
AP5S1-201ENST00000246041 WDR62O43379 1518 aa30.22■■■□□ 2.43
AP5S1-201ENST00000246041 POLA1P09884 1462 aaPredicted RBP30.16■■■□□ 2.42
AP5S1-201ENST00000246041 SOGA1O94964 1423 aa30.08■■■□□ 2.41
AP5S1-201ENST00000246041 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
AP5S1-201ENST00000246041 CUX2O14529 1486 aa30.02■■■□□ 2.4
AP5S1-201ENST00000246041 FAM9AQ8IZU1 332 aaPredicted RBP29.99■■■□□ 2.39
AP5S1-201ENST00000246041 RUSC2Q8N2Y8 1516 aa29.94■■■□□ 2.38
AP5S1-201ENST00000246041 ABCA10Q8WWZ4 1543 aa29.93■■■□□ 2.38
AP5S1-201ENST00000246041 IFT140Q96RY7 1462 aa29.92■■■□□ 2.38
AP5S1-201ENST00000246041 TARBP1Q13395 1621 aaKnown RBP29.92■■■□□ 2.38
AP5S1-201ENST00000246041 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
AP5S1-201ENST00000246041 TDRD9Q8NDG6 1382 aaKnown RBP29.85■■■□□ 2.37
AP5S1-201ENST00000246041 WDR97A6NE52 1622 aa29.83■■■□□ 2.37
AP5S1-201ENST00000246041 EEA1Q15075 1411 aa29.83■■■□□ 2.37
AP5S1-201ENST00000246041 ZNF608Q9ULD9 1512 aaPredicted RBP29.79■■■□□ 2.36
AP5S1-201ENST00000246041 CSRNP3Q8WYN3 585 aa29.77■■■□□ 2.36
AP5S1-201ENST00000246041 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.35
AP5S1-201ENST00000246041 GAPVD1Q14C86 1478 aa29.73■■■□□ 2.35
AP5S1-201ENST00000246041 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
AP5S1-201ENST00000246041 IGF1RP08069 1367 aa29.68■■■□□ 2.34
AP5S1-201ENST00000246041 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.33
AP5S1-201ENST00000246041 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
AP5S1-201ENST00000246041 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
AP5S1-201ENST00000246041 LOC105371045A0A1W2PR82 267 aa29.57■■■□□ 2.32
AP5S1-201ENST00000246041 ERICH3Q5RHP9 1530 aa29.57■■■□□ 2.32
AP5S1-201ENST00000246041 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
AP5S1-201ENST00000246041 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
AP5S1-201ENST00000246041 PRXQ9BXM0 1461 aa29.51■■■□□ 2.32
AP5S1-201ENST00000246041 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.3
AP5S1-201ENST00000246041 KIF21BO75037 1637 aa29.44■■■□□ 2.3
AP5S1-201ENST00000246041 RAPGEF2Q9Y4G8 1499 aa29.44■■■□□ 2.3
AP5S1-201ENST00000246041 CUL7Q14999 1698 aa29.44■■■□□ 2.3
AP5S1-201ENST00000246041 GOLGA3Q08378 1498 aa29.4■■■□□ 2.3
AP5S1-201ENST00000246041 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
AP5S1-201ENST00000246041 MAGI1Q96QZ7 1491 aaPredicted RBP29.39■■■□□ 2.29
AP5S1-201ENST00000246041 ADAMTS12P58397 1594 aa29.37■■■□□ 2.29
AP5S1-201ENST00000246041 UBTFP17480 764 aaKnown RBP29.36■■■□□ 2.29
AP5S1-201ENST00000246041 FBLN2P98095 1184 aa29.3■■■□□ 2.28
AP5S1-201ENST00000246041 CHMP7Q8WUX9 453 aaPredicted RBP29.29■■■□□ 2.28
AP5S1-201ENST00000246041 SYNJ2O15056 1496 aa29.28■■■□□ 2.28
AP5S1-201ENST00000246041 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
AP5S1-201ENST00000246041 TNIKQ9UKE5 1360 aa29.21■■■□□ 2.27
AP5S1-201ENST00000246041 RANGAP1P46060 587 aaPredicted RBP29.08■■■□□ 2.25
AP5S1-201ENST00000246041 CHD1O14646 1710 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms