RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
TRAK1-210ENST00000613405 DCAF8L2P0C7V8 631 aa23■■□□□ 1.27
TRAK1-210ENST00000613405 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
TRAK1-210ENST00000613405 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
TRAK1-210ENST00000613405 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
TRAK1-210ENST00000613405 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
TRAK1-210ENST00000613405 PELP1Q8IZL8 1130 aaKnown RBP20.79■□□□□ 0.92
TRAK1-210ENST00000613405 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
TRAK1-210ENST00000613405 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
TRAK1-210ENST00000613405 CENPBP07199 599 aaPredicted RBP20.47■□□□□ 0.87
TRAK1-210ENST00000613405 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
TRAK1-210ENST00000613405 APLP2Q06481 763 aa20.41■□□□□ 0.86
TRAK1-210ENST00000613405 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.85
TRAK1-210ENST00000613405 HRCP23327 699 aa20.32■□□□□ 0.84
TRAK1-210ENST00000613405 CCER1Q8TC90 406 aaPredicted RBP20.28■□□□□ 0.84
TRAK1-210ENST00000613405 MYT1Q01538 1121 aa20.19■□□□□ 0.82
TRAK1-210ENST00000613405 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
TRAK1-210ENST00000613405 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
TRAK1-210ENST00000613405 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
TRAK1-210ENST00000613405 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
TRAK1-210ENST00000613405 YTHDC1Q96MU7 727 aaKnown RBP20■□□□□ 0.79
TRAK1-210ENST00000613405 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
TRAK1-210ENST00000613405 PPARGC1BQ86YN6 1023 aaKnown RBP19.94■□□□□ 0.78
TRAK1-210ENST00000613405 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
TRAK1-210ENST00000613405 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
TRAK1-210ENST00000613405 NEFLP07196 543 aa19.72■□□□□ 0.75
TRAK1-210ENST00000613405 ABCC9O60706 1549 aa19.59■□□□□ 0.73
TRAK1-210ENST00000613405 DIEXFQ68CQ4 756 aaKnown RBP19.44■□□□□ 0.7
TRAK1-210ENST00000613405 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
TRAK1-210ENST00000613405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
TRAK1-210ENST00000613405 ITGAEP38570 1179 aa19.36■□□□□ 0.69
TRAK1-210ENST00000613405 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
TRAK1-210ENST00000613405 GTF3C3Q9Y5Q9 886 aa19.3■□□□□ 0.68
TRAK1-210ENST00000613405 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
TRAK1-210ENST00000613405 ACIN1Q9UKV3 1341 aaKnown RBP19.09■□□□□ 0.65
TRAK1-210ENST00000613405 DAXXQ9UER7 740 aaPredicted RBP18.95■□□□□ 0.62
TRAK1-210ENST00000613405 ZNF316A6NFI3 1004 aaPredicted RBP18.94■□□□□ 0.62
TRAK1-210ENST00000613405 BCANQ96GW7 911 aa18.93■□□□□ 0.62
TRAK1-210ENST00000613405 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
TRAK1-210ENST00000613405 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
TRAK1-210ENST00000613405 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
TRAK1-210ENST00000613405 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
TRAK1-210ENST00000613405 CNGB1Q14028 1251 aaPredicted RBP18.87■□□□□ 0.61
TRAK1-210ENST00000613405 RTL5Q5HYW3 569 aaPredicted RBP18.85■□□□□ 0.61
TRAK1-210ENST00000613405 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
TRAK1-210ENST00000613405 MYT1LQ9UL68 1186 aa18.79■□□□□ 0.6
TRAK1-210ENST00000613405 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
TRAK1-210ENST00000613405 NEUROD1Q13562 356 aa18.73■□□□□ 0.59
TRAK1-210ENST00000613405 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
TRAK1-210ENST00000613405 P3H3Q8IVL6 736 aa18.67■□□□□ 0.58
TRAK1-210ENST00000613405 CDK11AQ9UQ88 783 aaPredicted RBP18.67■□□□□ 0.58
TRAK1-210ENST00000613405 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
TRAK1-210ENST00000613405 ANP32CO43423 234 aa18.64■□□□□ 0.58
TRAK1-210ENST00000613405 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
TRAK1-210ENST00000613405 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
TRAK1-210ENST00000613405 FBLN2P98095 1184 aa18.55■□□□□ 0.56
TRAK1-210ENST00000613405 CLSPNQ9HAW4 1339 aa18.51■□□□□ 0.55
TRAK1-210ENST00000613405 ARID3CA6NKF2 412 aa18.5■□□□□ 0.55
TRAK1-210ENST00000613405 FKBP8Q14318 412 aa18.46■□□□□ 0.55
TRAK1-210ENST00000613405 ZNF326Q5BKZ1 582 aaKnown RBP18.42■□□□□ 0.54
TRAK1-210ENST00000613405 MIER1Q8N108 512 aa18.36■□□□□ 0.53
TRAK1-210ENST00000613405 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
TRAK1-210ENST00000613405 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
TRAK1-210ENST00000613405 ANP32AP39687 249 aaKnown RBP18.32■□□□□ 0.52
TRAK1-210ENST00000613405 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
TRAK1-210ENST00000613405 ZNF777Q9ULD5 760 aaPredicted RBP18.27■□□□□ 0.51
TRAK1-210ENST00000613405 NACADO15069 1562 aa18.26■□□□□ 0.51
TRAK1-210ENST00000613405 CLIP1P30622 1438 aa18.25■□□□□ 0.51
TRAK1-210ENST00000613405 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
TRAK1-210ENST00000613405 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRAK1-210ENST00000613405 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
TRAK1-210ENST00000613405 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
TRAK1-210ENST00000613405 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
TRAK1-210ENST00000613405 EEA1Q15075 1411 aa18.16■□□□□ 0.5
TRAK1-210ENST00000613405 TONSLQ96HA7 1378 aa18.13■□□□□ 0.49
TRAK1-210ENST00000613405 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
TRAK1-210ENST00000613405 EIF5BO60841 1220 aaKnown RBP18.11■□□□□ 0.49
TRAK1-210ENST00000613405 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
TRAK1-210ENST00000613405 NBR1Q14596 966 aa18.08■□□□□ 0.48
TRAK1-210ENST00000613405 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
TRAK1-210ENST00000613405 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
TRAK1-210ENST00000613405 ANP32EQ9BTT0 268 aa18.07■□□□□ 0.48
TRAK1-210ENST00000613405 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
TRAK1-210ENST00000613405 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
TRAK1-210ENST00000613405 MTUS2Q5JR59 1369 aa18.05■□□□□ 0.48
TRAK1-210ENST00000613405 IRX6P78412 446 aaPredicted RBP18.01■□□□□ 0.47
TRAK1-210ENST00000613405 ZBTB47Q9UFB7 747 aaPredicted RBP18.01■□□□□ 0.47
TRAK1-210ENST00000613405 CANXP27824 592 aaKnown RBP18■□□□□ 0.47
TRAK1-210ENST00000613405 CCDC136Q96JN2 1154 aa17.99■□□□□ 0.47
TRAK1-210ENST00000613405 HIRIP3Q9BW71 556 aaPredicted RBP17.97■□□□□ 0.47
TRAK1-210ENST00000613405 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.47
TRAK1-210ENST00000613405 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
TRAK1-210ENST00000613405 SOGA1O94964 1423 aa17.95■□□□□ 0.46
TRAK1-210ENST00000613405 KIF27Q86VH2 1401 aa17.95■□□□□ 0.46
TRAK1-210ENST00000613405 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
TRAK1-210ENST00000613405 MRS2Q9HD23 443 aa17.9■□□□□ 0.46
TRAK1-210ENST00000613405 RRP7BPQ9NSQ0 103 aa17.9■□□□□ 0.46
TRAK1-210ENST00000613405 SALL2Q9Y467 1007 aaPredicted RBP17.89■□□□□ 0.45
TRAK1-210ENST00000613405 SUPT16HQ9Y5B9 1047 aaKnown RBP17.88■□□□□ 0.45
TRAK1-210ENST00000613405 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms