Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA1P02647 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 AC010327.5-201ENST00000586923 3061 ntBASIC14.39□□□□□ -0.11
APOA1P02647 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA1P02647 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.39□□□□□ -0.11
APOA1P02647 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.39□□□□□ -0.11
APOA1P02647 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
APOA1P02647 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
APOA1P02647 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 MIR935-201ENST00000401179 91 ntBASIC14.38□□□□□ -0.11
APOA1P02647 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.38□□□□□ -0.11
APOA1P02647 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.38□□□□□ -0.11
APOA1P02647 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.38□□□□□ -0.11
APOA1P02647 AL441883.1-201ENST00000566170 1045 ntBASIC14.38□□□□□ -0.11
APOA1P02647 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.38□□□□□ -0.11
APOA1P02647 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.38□□□□□ -0.11
APOA1P02647 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APOA1P02647 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.38□□□□□ -0.11
APOA1P02647 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.38□□□□□ -0.11
APOA1P02647 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
APOA1P02647 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA1P02647 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.37□□□□□ -0.11
APOA1P02647 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
APOA1P02647 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
APOA1P02647 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA1P02647 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA1P02647 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA1P02647 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA1P02647 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
APOA1P02647 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.37□□□□□ -0.11
APOA1P02647 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA1P02647 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.37□□□□□ -0.11
APOA1P02647 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APOA1P02647 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA1P02647 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 MROH4P-201ENST00000431302 1578 ntBASIC14.37□□□□□ -0.11
APOA1P02647 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.37□□□□□ -0.11
APOA1P02647 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
APOA1P02647 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA1P02647 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms