Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S2P59780 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S2P59780 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
AP3S2P59780 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.9□□□□□ -0.18
AP3S2P59780 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.9□□□□□ -0.18
AP3S2P59780 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S2P59780 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
AP3S2P59780 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.9□□□□□ -0.18
AP3S2P59780 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 LINC01568-207ENST00000641790 1380 ntBASIC13.9□□□□□ -0.18
AP3S2P59780 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S2P59780 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 CICP4-201ENST00000447359 2812 ntBASIC13.9□□□□□ -0.18
AP3S2P59780 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
AP3S2P59780 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S2P59780 AC090616.6-203ENST00000579186 1945 ntBASIC13.9□□□□□ -0.18
AP3S2P59780 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.9□□□□□ -0.19
AP3S2P59780 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
AP3S2P59780 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
AP3S2P59780 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
AP3S2P59780 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S2P59780 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
AP3S2P59780 AC139749.1-202ENST00000617529 3139 ntBASIC13.89□□□□□ -0.19
AP3S2P59780 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.89□□□□□ -0.19
AP3S2P59780 AC104581.4-201ENST00000623126 3052 ntBASIC13.89□□□□□ -0.19
AP3S2P59780 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 PRORSD1P-201ENST00000295112 541 ntBASIC13.89□□□□□ -0.19
AP3S2P59780 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.89□□□□□ -0.19
AP3S2P59780 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.89□□□□□ -0.19
AP3S2P59780 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.89□□□□□ -0.19
AP3S2P59780 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.89□□□□□ -0.19
AP3S2P59780 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.89□□□□□ -0.19
AP3S2P59780 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.89□□□□□ -0.19
AP3S2P59780 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.89□□□□□ -0.19
AP3S2P59780 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
AP3S2P59780 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S2P59780 CYP2A7P1-201ENST00000595391 815 ntBASIC13.89□□□□□ -0.19
AP3S2P59780 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.89□□□□□ -0.19
AP3S2P59780 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
AP3S2P59780 AC105250.1-201ENST00000509378 2057 ntBASIC13.89□□□□□ -0.19
AP3S2P59780 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S2P59780 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S2P59780 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S2P59780 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
AP3S2P59780 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S2P59780 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 AC011477.6-201ENST00000604980 1927 ntBASIC13.88□□□□□ -0.19
AP3S2P59780 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms