Protein–RNA interactions for Protein: P45378

TNNT3, Troponin T, fast skeletal muscle, humanhuman

Predicted RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3P45378 SCARNA2-201ENST00000458748 420 ntBASIC17.53■□□□□ 0.4
TNNT3P45378 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNT3P45378 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.53■□□□□ 0.4
TNNT3P45378 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNT3P45378 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNT3P45378 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.53■□□□□ 0.4
TNNT3P45378 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNT3P45378 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNT3P45378 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.53■□□□□ 0.4
TNNT3P45378 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.53■□□□□ 0.4
TNNT3P45378 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNT3P45378 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNT3P45378 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TNNT3P45378 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TNNT3P45378 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNT3P45378 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNT3P45378 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TNNT3P45378 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNT3P45378 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNNT3P45378 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.52■□□□□ 0.4
TNNT3P45378 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.52■□□□□ 0.4
TNNT3P45378 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TNNT3P45378 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
TNNT3P45378 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNNT3P45378 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNNT3P45378 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.52■□□□□ 0.4
TNNT3P45378 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.52■□□□□ 0.4
TNNT3P45378 TSPY19P-201ENST00000418461 509 ntBASIC17.52■□□□□ 0.4
TNNT3P45378 TSPY18P-201ENST00000441642 509 ntBASIC17.52■□□□□ 0.4
TNNT3P45378 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 CLEC4GP1-201ENST00000596555 870 ntBASIC17.52■□□□□ 0.4
TNNT3P45378 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.52■□□□□ 0.4
TNNT3P45378 AL139288.1-201ENST00000623748 933 ntBASIC17.52■□□□□ 0.4
TNNT3P45378 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TNNT3P45378 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 SIGLEC16-201ENST00000599858 1437 ntBASIC17.52■□□□□ 0.4
TNNT3P45378 AP005117.1-202ENST00000581724 1908 ntBASIC17.52■□□□□ 0.4
TNNT3P45378 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNT3P45378 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TNNT3P45378 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNNT3P45378 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNNT3P45378 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.52■□□□□ 0.39
TNNT3P45378 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNNT3P45378 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
TNNT3P45378 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.52■□□□□ 0.39
TNNT3P45378 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNNT3P45378 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNNT3P45378 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TNNT3P45378 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.52■□□□□ 0.39
TNNT3P45378 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNNT3P45378 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.52■□□□□ 0.39
TNNT3P45378 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNNT3P45378 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNNT3P45378 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TNNT3P45378 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TNNT3P45378 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 AL137784.3-201ENST00000623858 2288 ntBASIC17.51■□□□□ 0.39
TNNT3P45378 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TNNT3P45378 AC079776.2-201ENST00000641154 1609 ntBASIC17.51■□□□□ 0.39
TNNT3P45378 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.51■□□□□ 0.39
TNNT3P45378 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.51■□□□□ 0.39
TNNT3P45378 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TNNT3P45378 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.51■□□□□ 0.39
TNNT3P45378 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TNNT3P45378 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.51■□□□□ 0.39
TNNT3P45378 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNNT3P45378 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.51■□□□□ 0.39
TNNT3P45378 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms