Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC009336.1-201ENST00000608941 1553 ntBASIC16.12■□□□□ 0.17
APLFQ8IW19 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
APLFQ8IW19 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.12■□□□□ 0.17
APLFQ8IW19 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
APLFQ8IW19 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.12■□□□□ 0.17
APLFQ8IW19 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
APLFQ8IW19 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
APLFQ8IW19 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.11■□□□□ 0.17
APLFQ8IW19 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.11■□□□□ 0.17
APLFQ8IW19 AP000344.2-201ENST00000512987 629 ntBASIC16.11■□□□□ 0.17
APLFQ8IW19 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.11■□□□□ 0.17
APLFQ8IW19 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 KRT19P2-202ENST00000557173 1012 ntBASIC16.11■□□□□ 0.17
APLFQ8IW19 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 AC007064.4-201ENST00000637740 555 ntBASIC16.11■□□□□ 0.17
APLFQ8IW19 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 BCAR1-209ENST00000546196 1340 ntBASIC16.11■□□□□ 0.17
APLFQ8IW19 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
APLFQ8IW19 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 AC097637.2-201ENST00000624096 1997 ntBASIC16.11■□□□□ 0.17
APLFQ8IW19 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
APLFQ8IW19 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.11■□□□□ 0.17
APLFQ8IW19 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APLFQ8IW19 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
APLFQ8IW19 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
APLFQ8IW19 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.1■□□□□ 0.17
APLFQ8IW19 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
APLFQ8IW19 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.1■□□□□ 0.17
APLFQ8IW19 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.1■□□□□ 0.17
APLFQ8IW19 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.1■□□□□ 0.17
APLFQ8IW19 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APLFQ8IW19 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
APLFQ8IW19 AC002558.1-201ENST00000488906 803 ntBASIC16.1■□□□□ 0.17
APLFQ8IW19 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.1■□□□□ 0.17
APLFQ8IW19 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.1■□□□□ 0.17
APLFQ8IW19 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.1■□□□□ 0.17
APLFQ8IW19 AL031432.2-201ENST00000566714 459 ntBASIC16.1■□□□□ 0.17
APLFQ8IW19 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.1■□□□□ 0.17
APLFQ8IW19 AL928711.1-201ENST00000570165 459 ntBASIC16.1■□□□□ 0.17
APLFQ8IW19 OR7E47P-204ENST00000575924 449 ntBASIC16.1■□□□□ 0.17
APLFQ8IW19 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.1■□□□□ 0.17
APLFQ8IW19 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.1■□□□□ 0.17
APLFQ8IW19 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms