Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 FSCN1-205ENST00000473330 2215 ntTSL 219.98■□□□□ 0.799e-11■■□□□ 12.5
RPS3P23396 CTSA-207ENST00000484855 2183 ntTSL 1 (best)16.58■□□□□ 0.256e-9■■□□□ 12.5
RPS3P23396 CTSA-210ENST00000606000 644 ntTSL 311.89□□□□□ -0.516e-9■■□□□ 12.5
RPS3P23396 CD59-211ENST00000528987 3716 ntTSL 1 (best)4.83□□□□□ -1.647e-15■■□□□ 12.5
RPS3P23396 CD59-212ENST00000533181 424 ntTSL 54.01□□□□□ -1.777e-15■■□□□ 12.5
RPS3P23396 DARS-202ENST00000422708 623 ntTSL 26.03□□□□□ -1.443e-10■■□□□ 12.5
RPS3P23396 HMGCR-206ENST00000508070 450 ntTSL 37.41□□□□□ -1.228e-13■■□□□ 12.5
RPS3P23396 CLU-203ENST00000518050 718 ntTSL 219.63■□□□□ 0.739e-20■■□□□ 12.5
RPS3P23396 CLU-204ENST00000519472 303 ntTSL 218.03■□□□□ 0.489e-20■■□□□ 12.5
RPS3P23396 CLU-214ENST00000523396 426 ntTSL 318.03■□□□□ 0.489e-20■■□□□ 12.5
RPS3P23396 EPRS-206ENST00000609181 2968 ntTSL 1 (best)10.41□□□□□ -0.742e-7■■□□□ 12.5
RPS3P23396 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.78■■■□□ 2.046e-12■■□□□ 12.5
RPS3P23396 RAB1A-205ENST00000494188 771 ntTSL 222.43■■□□□ 1.183e-15■■□□□ 12.5
RPS3P23396 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.95■□□□□ 0.943e-15■■□□□ 12.5
RPS3P23396 RPL14-204ENST00000435633 966 ntTSL 220.76■□□□□ 0.911e-6■■□□□ 12.5
RPS3P23396 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.83■□□□□ 0.443e-15■■□□□ 12.5
RPS3P23396 NFKBIA-207ENST00000557100 825 ntTSL 317.47■□□□□ 0.396e-12■■□□□ 12.5
RPS3P23396 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.296e-12■■□□□ 12.5
RPS3P23396 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.083e-15■■□□□ 12.5
RPS3P23396 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.11e-6■■□□□ 12.5
RPS3P23396 NFKBIA-203ENST00000554001 1396 ntTSL 514.09□□□□□ -0.156e-12■■□□□ 12.5
RPS3P23396 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.54□□□□□ -0.243e-15■■□□□ 12.5
RPS3P23396 RPL14-203ENST00000416518 812 ntTSL 3 BASIC11.71□□□□□ -0.531e-6■■□□□ 12.5
RPS3P23396 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC11.62□□□□□ -0.556e-12■■□□□ 12.5
RPS3P23396 NFKBIA-206ENST00000556664 381 ntTSL 211.19□□□□□ -0.626e-12■■□□□ 12.5
RPS3P23396 ARF4-207ENST00000493378 548 ntTSL 310.62□□□□□ -0.716e-12■■□□□ 12.5
RPS3P23396 NFKBIA-204ENST00000555371 690 ntTSL 310.14□□□□□ -0.796e-12■■□□□ 12.5
RPS3P23396 ARSB-205ENST00000521800 1082 ntTSL 27.84□□□□□ -1.156e-12■■□□□ 12.5
RPS3P23396 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.271e-6■■□□□ 12.5
RPS3P23396 RPL14-207ENST00000465325 788 ntTSL 36.25□□□□□ -1.411e-6■■□□□ 12.5
RPS3P23396 RPL10-212ENST00000479366 569 ntTSL 412.78□□□□□ -0.366e-77■■□□□ 12.5
RPS3P23396 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.11■■□□□ 1.293e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.46■■□□□ 1.193e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.58■□□□□ 0.43e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)15.3■□□□□ 0.043e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.023e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-213ENST00000599614 2447 ntTSL 514.81□□□□□ -0.043e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.63□□□□□ -0.073e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.07□□□□□ -0.163e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.253e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.92□□□□□ -0.343e-6■■□□□ 12.5
RPS3P23396 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC11.38□□□□□ -0.593e-6■■□□□ 12.5
RPS3P23396 FAM234B-202ENST00000416494 2623 ntTSL 211.39□□□□□ -0.591e-78■■□□□ 12.5
RPS3P23396 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.741e-78■■□□□ 12.5
RPS3P23396 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.08□□□□□ -1.285e-7■■□□□ 12.5
RPS3P23396 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.07■■□□□ 1.121e-9■■□□□ 12.5
RPS3P23396 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.36■■□□□ 1.011e-9■■□□□ 12.5
RPS3P23396 RCN2-204ENST00000557805 691 ntTSL 319.76■□□□□ 0.751e-9■■□□□ 12.5
RPS3P23396 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.091e-9■■□□□ 12.5
RPS3P23396 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)13.5□□□□□ -0.251e-7■■□□□ 12.5
RPS3P23396 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.242e-39■■□□□ 12.5
RPS3P23396 HNRNPF-205ENST00000477108 636 ntTSL 1 (best)15.11■□□□□ 0.013e-12■■□□□ 12.5
RPS3P23396 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.162e-17■■□□□ 12.5
RPS3P23396 RPL23-205ENST00000470646 333 ntTSL 312.82□□□□□ -0.361e-20■■□□□ 12.5
RPS3P23396 RPL23-202ENST00000378096 392 ntTSL 311.82□□□□□ -0.521e-20■■□□□ 12.5
RPS3P23396 MARS-223ENST00000551431 559 ntTSL 418.41■□□□□ 0.547e-9■■□□□ 12.5
RPS3P23396 CANX-213ENST00000507307 582 ntTSL 518.53■□□□□ 0.563e-14■■□□□ 12.5
RPS3P23396 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.095e-7■■□□□ 12.5
RPS3P23396 HERPUD1-219ENST00000570273 1425 ntTSL 1 (best)15.26■□□□□ 0.035e-7■■□□□ 12.5
RPS3P23396 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.92□□□□□ -0.185e-7■■□□□ 12.5
RPS3P23396 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.27□□□□□ -0.295e-7■■□□□ 12.5
RPS3P23396 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.35e-7■■□□□ 12.5
RPS3P23396 FLNA-215ENST00000474358 696 ntTSL 216.96■□□□□ 0.311e-16■■□□□ 12.4
RPS3P23396 MED15-220ENST00000461076 826 ntTSL 313.58□□□□□ -0.249e-19■■□□□ 12.4
RPS3P23396 SMARCA1-204ENST00000478420 561 ntTSL 32.14□□□□□ -2.078e-16■■□□□ 12.4
RPS3P23396 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.431e-65■■□□□ 12.4
RPS3P23396 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.46□□□□□ -1.531e-65■■□□□ 12.4
RPS3P23396 COPB2-206ENST00000510181 1037 ntTSL 27.61□□□□□ -1.199e-7■■□□□ 12.4
RPS3P23396 COPB2-213ENST00000515006 548 ntTSL 55.94□□□□□ -1.469e-7■■□□□ 12.4
RPS3P23396 HMG20B-209ENST00000470356 806 ntTSL 1 (best)30.13■■■□□ 2.416e-9■■□□□ 12.4
RPS3P23396 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.316e-9■■□□□ 12.4
RPS3P23396 HMG20B-201ENST00000262949 886 ntTSL 522.15■■□□□ 1.146e-9■■□□□ 12.4
RPS3P23396 HMG20B-205ENST00000435022 616 ntTSL 521.39■■□□□ 1.016e-9■■□□□ 12.4
RPS3P23396 HMG20B-203ENST00000416526 711 ntTSL 321.25■□□□□ 0.996e-9■■□□□ 12.4
RPS3P23396 HMG20B-204ENST00000417382 561 ntTSL 420.59■□□□□ 0.896e-9■■□□□ 12.4
RPS3P23396 HMG20B-206ENST00000453933 759 ntTSL 220.58■□□□□ 0.896e-9■■□□□ 12.4
RPS3P23396 HMG20B-213ENST00000488973 2434 ntTSL 1 (best)18.98■□□□□ 0.636e-9■■□□□ 12.4
RPS3P23396 P4HB-208ENST00000473021 914 ntTSL 1 (best)15.69■□□□□ 0.14e-22■■□□□ 12.4
RPS3P23396 GPI-216ENST00000592144 678 ntTSL 317.66■□□□□ 0.427e-14■■□□□ 12.4
RPS3P23396 GPI-209ENST00000589399 565 ntTSL 516.94■□□□□ 0.37e-14■■□□□ 12.4
RPS3P23396 GPI-211ENST00000589640 571 ntTSL 416.84■□□□□ 0.297e-14■■□□□ 12.4
RPS3P23396 GPI-215ENST00000591204 559 ntTSL 48.99□□□□□ -0.977e-14■■□□□ 12.4
RPS3P23396 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.816e-26■■□□□ 12.4
RPS3P23396 ATP2A2-207ENST00000548169 2951 ntTSL 27.5□□□□□ -1.216e-7■■□□□ 12.4
RPS3P23396 FN1-214ENST00000460217 804 ntTSL 210.61□□□□□ -0.712e-56■■□□□ 12.4
RPS3P23396 FN1-210ENST00000438981 723 ntTSL 27.76□□□□□ -1.172e-56■■□□□ 12.4
RPS3P23396 ACTB-202ENST00000414620 561 ntTSL 414.93□□□□□ -0.022e-57■■□□□ 12.4
RPS3P23396 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.534e-7■■□□□ 12.4
RPS3P23396 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.464e-7■■□□□ 12.4
RPS3P23396 NFE2L2-205ENST00000430047 451 ntTSL 323■■□□□ 1.276e-10■■□□□ 12.4
RPS3P23396 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.956e-12■■□□□ 12.4
RPS3P23396 NFE2L2-203ENST00000421929 979 ntTSL 1 (best)19.69■□□□□ 0.746e-10■■□□□ 12.4
RPS3P23396 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.91■□□□□ 0.36e-10■■□□□ 12.4
RPS3P23396 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.42■□□□□ 0.066e-10■■□□□ 12.4
RPS3P23396 OSBPL9-209ENST00000473207 578 ntTSL 415.29■□□□□ 0.046e-10■■□□□ 12.4
RPS3P23396 OSBPL9-225ENST00000533884 595 ntTSL 415.29■□□□□ 0.046e-10■■□□□ 12.4
RPS3P23396 OSBPL9-211ENST00000481937 630 ntTSL 314.53□□□□□ -0.086e-10■■□□□ 12.4
RPS3P23396 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.15□□□□□ -0.146e-10■■□□□ 12.4
RPS3P23396 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.15□□□□□ -0.36e-10■■□□□ 12.4
RPS3P23396 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.346e-12■■□□□ 12.4
Retrieved 100 of 24,271 protein–RNA pairs in 251.2 ms