RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
FN1-214ENST00000460217 CCDC180Q9P1Z9 1646 aa22.36■■□□□ 1.17
FN1-214ENST00000460217 ABCC9O60706 1549 aa21.37■■□□□ 1.01
FN1-214ENST00000460217 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
FN1-214ENST00000460217 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
FN1-214ENST00000460217 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
FN1-214ENST00000460217 NACADO15069 1562 aa20.91■□□□□ 0.94
FN1-214ENST00000460217 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
FN1-214ENST00000460217 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
FN1-214ENST00000460217 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
FN1-214ENST00000460217 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
FN1-214ENST00000460217 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
FN1-214ENST00000460217 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
FN1-214ENST00000460217 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
FN1-214ENST00000460217 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
FN1-214ENST00000460217 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
FN1-214ENST00000460217 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
FN1-214ENST00000460217 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
FN1-214ENST00000460217 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
FN1-214ENST00000460217 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
FN1-214ENST00000460217 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
FN1-214ENST00000460217 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
FN1-214ENST00000460217 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
FN1-214ENST00000460217 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
FN1-214ENST00000460217 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
FN1-214ENST00000460217 WIZO95785 1651 aa19.31■□□□□ 0.68
FN1-214ENST00000460217 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
FN1-214ENST00000460217 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
FN1-214ENST00000460217 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
FN1-214ENST00000460217 BAZ1BQ9UIG0 1483 aaKnown RBP19.19■□□□□ 0.66
FN1-214ENST00000460217 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
FN1-214ENST00000460217 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
FN1-214ENST00000460217 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
FN1-214ENST00000460217 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
FN1-214ENST00000460217 CFTRP13569 1480 aa18.71■□□□□ 0.59
FN1-214ENST00000460217 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
FN1-214ENST00000460217 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
FN1-214ENST00000460217 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
FN1-214ENST00000460217 NESP48681 1621 aa18.63■□□□□ 0.57
FN1-214ENST00000460217 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
FN1-214ENST00000460217 FANCD2Q9BXW9 1451 aa18.5■□□□□ 0.55
FN1-214ENST00000460217 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
FN1-214ENST00000460217 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
FN1-214ENST00000460217 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
FN1-214ENST00000460217 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.52
FN1-214ENST00000460217 ABCC8Q09428 1581 aa18.32■□□□□ 0.52
FN1-214ENST00000460217 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
FN1-214ENST00000460217 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
FN1-214ENST00000460217 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
FN1-214ENST00000460217 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
FN1-214ENST00000460217 CUX1P39880 1505 aa18.28■□□□□ 0.52
FN1-214ENST00000460217 WDR62O43379 1518 aa18.27■□□□□ 0.51
FN1-214ENST00000460217 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
FN1-214ENST00000460217 TOP2BQ02880 1626 aa18.26■□□□□ 0.51
FN1-214ENST00000460217 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
FN1-214ENST00000460217 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
FN1-214ENST00000460217 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
FN1-214ENST00000460217 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
FN1-214ENST00000460217 TRIM41Q8WV44 630 aa18.13■□□□□ 0.49
FN1-214ENST00000460217 CUX2O14529 1486 aa18.09■□□□□ 0.49
FN1-214ENST00000460217 IFT140Q96RY7 1462 aa18.04■□□□□ 0.48
FN1-214ENST00000460217 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
FN1-214ENST00000460217 SOGA1O94964 1423 aa18.04■□□□□ 0.48
FN1-214ENST00000460217 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
FN1-214ENST00000460217 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
FN1-214ENST00000460217 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
FN1-214ENST00000460217 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
FN1-214ENST00000460217 KIF27Q86VH2 1401 aa17.9■□□□□ 0.46
FN1-214ENST00000460217 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
FN1-214ENST00000460217 EEA1Q15075 1411 aa17.88■□□□□ 0.45
FN1-214ENST00000460217 TDRD9Q8NDG6 1382 aaKnown RBP17.87■□□□□ 0.45
FN1-214ENST00000460217 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
FN1-214ENST00000460217 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
FN1-214ENST00000460217 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.45
FN1-214ENST00000460217 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.455e-30■■■■■ 26.9
FN1-214ENST00000460217 PBRM1Q86U86 1689 aa17.81■□□□□ 0.44
FN1-214ENST00000460217 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
FN1-214ENST00000460217 GRIN2BQ13224 1484 aa17.8■□□□□ 0.44
FN1-214ENST00000460217 IGF1RP08069 1367 aa17.77■□□□□ 0.43
FN1-214ENST00000460217 CUL7Q14999 1698 aa17.74■□□□□ 0.43
FN1-214ENST00000460217 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
FN1-214ENST00000460217 MAGI1Q96QZ7 1491 aaPredicted RBP17.73■□□□□ 0.43
FN1-214ENST00000460217 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
FN1-214ENST00000460217 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
FN1-214ENST00000460217 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
FN1-214ENST00000460217 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
FN1-214ENST00000460217 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
FN1-214ENST00000460217 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
FN1-214ENST00000460217 KIF21BO75037 1637 aa17.66■□□□□ 0.42
FN1-214ENST00000460217 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
FN1-214ENST00000460217 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
FN1-214ENST00000460217 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
FN1-214ENST00000460217 CHD1O14646 1710 aa17.57■□□□□ 0.4
FN1-214ENST00000460217 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
FN1-214ENST00000460217 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
FN1-214ENST00000460217 NUP160Q12769 1436 aa17.5■□□□□ 0.39
FN1-214ENST00000460217 FBLN2P98095 1184 aa17.48■□□□□ 0.39
FN1-214ENST00000460217 CTTNBP2Q8WZ74 1663 aa17.46■□□□□ 0.39
FN1-214ENST00000460217 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
FN1-214ENST00000460217 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms