RNA–Protein interactions for RNA: ENST00000438981.1

FN1-210, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-210ENST00000438981 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.77
FN1-210ENST00000438981 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
FN1-210ENST00000438981 ABCC9O60706 1549 aa17.42■□□□□ 0.38
FN1-210ENST00000438981 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.28
FN1-210ENST00000438981 NACADO15069 1562 aa16.71■□□□□ 0.27
FN1-210ENST00000438981 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
FN1-210ENST00000438981 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.24
FN1-210ENST00000438981 UNC13AQ9UPW8 1703 aa16.58■□□□□ 0.24
FN1-210ENST00000438981 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
FN1-210ENST00000438981 DCAF8L2P0C7V8 631 aa16.42■□□□□ 0.22
FN1-210ENST00000438981 BICRAQ9NZM4 1560 aa16.31■□□□□ 0.2
FN1-210ENST00000438981 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
FN1-210ENST00000438981 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
FN1-210ENST00000438981 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
FN1-210ENST00000438981 DNAJC5BQ9UF47 199 aa15.98■□□□□ 0.15
FN1-210ENST00000438981 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
FN1-210ENST00000438981 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.12
FN1-210ENST00000438981 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
FN1-210ENST00000438981 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
FN1-210ENST00000438981 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
FN1-210ENST00000438981 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
FN1-210ENST00000438981 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
FN1-210ENST00000438981 PEG3Q9GZU2 1588 aa15.37■□□□□ 0.05
FN1-210ENST00000438981 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
FN1-210ENST00000438981 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
FN1-210ENST00000438981 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
FN1-210ENST00000438981 BAZ1BQ9UIG0 1483 aaKnown RBP15.26■□□□□ 0.03
FN1-210ENST00000438981 WIZO95785 1651 aa15.23■□□□□ 0.03
FN1-210ENST00000438981 NESP48681 1621 aa15.07■□□□□ 0
FN1-210ENST00000438981 RSF1Q96T23 1441 aaPredicted RBP15.07■□□□□ 0
FN1-210ENST00000438981 LAMC3Q9Y6N6 1575 aa15.06■□□□□ 0
FN1-210ENST00000438981 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
FN1-210ENST00000438981 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
FN1-210ENST00000438981 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
FN1-210ENST00000438981 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
FN1-210ENST00000438981 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
FN1-210ENST00000438981 CUX2O14529 1486 aa14.93□□□□□ -0.02
FN1-210ENST00000438981 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
FN1-210ENST00000438981 PDS5BQ9NTI5 1447 aa14.84□□□□□ -0.03
FN1-210ENST00000438981 CFTRP13569 1480 aa14.82□□□□□ -0.04
FN1-210ENST00000438981 WDR62O43379 1518 aa14.78□□□□□ -0.04
FN1-210ENST00000438981 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
FN1-210ENST00000438981 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.04
FN1-210ENST00000438981 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
FN1-210ENST00000438981 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
FN1-210ENST00000438981 URB2Q14146 1524 aaKnown RBP14.66□□□□□ -0.06
FN1-210ENST00000438981 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
FN1-210ENST00000438981 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
FN1-210ENST00000438981 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
FN1-210ENST00000438981 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
FN1-210ENST00000438981 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
FN1-210ENST00000438981 EIF4G3O43432 1585 aaKnown RBP14.45□□□□□ -0.1
FN1-210ENST00000438981 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
FN1-210ENST00000438981 DNAJC5Q9H3Z4 198 aa14.44□□□□□ -0.1
FN1-210ENST00000438981 CUX1P39880 1505 aa14.41□□□□□ -0.1
FN1-210ENST00000438981 POLA1P09884 1462 aaPredicted RBP14.41□□□□□ -0.1
FN1-210ENST00000438981 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
FN1-210ENST00000438981 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
FN1-210ENST00000438981 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
FN1-210ENST00000438981 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
FN1-210ENST00000438981 CHD1O14646 1710 aa14.33□□□□□ -0.12
FN1-210ENST00000438981 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
FN1-210ENST00000438981 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
FN1-210ENST00000438981 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
FN1-210ENST00000438981 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
FN1-210ENST00000438981 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
FN1-210ENST00000438981 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.137e-30■■■■■ 26.9
FN1-210ENST00000438981 SOGA1O94964 1423 aa14.25□□□□□ -0.13
FN1-210ENST00000438981 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
FN1-210ENST00000438981 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
FN1-210ENST00000438981 SNAPC4Q5SXM2 1469 aa14.19□□□□□ -0.14
FN1-210ENST00000438981 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
FN1-210ENST00000438981 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
FN1-210ENST00000438981 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
FN1-210ENST00000438981 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
FN1-210ENST00000438981 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
FN1-210ENST00000438981 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
FN1-210ENST00000438981 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
FN1-210ENST00000438981 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
FN1-210ENST00000438981 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
FN1-210ENST00000438981 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
FN1-210ENST00000438981 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
FN1-210ENST00000438981 ARHGEF11O15085 1522 aa14.07□□□□□ -0.16
FN1-210ENST00000438981 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
FN1-210ENST00000438981 CEP170Q5SW79 1584 aa14□□□□□ -0.17
FN1-210ENST00000438981 GRIN2AQ12879 1464 aa14□□□□□ -0.17
FN1-210ENST00000438981 FBLN2P98095 1184 aa14□□□□□ -0.17
FN1-210ENST00000438981 CUL7Q14999 1698 aa13.98□□□□□ -0.17
FN1-210ENST00000438981 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
FN1-210ENST00000438981 FHAD1B1AJZ9 1412 aa13.96□□□□□ -0.18
FN1-210ENST00000438981 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
FN1-210ENST00000438981 SHROOM2Q13796 1616 aa13.94□□□□□ -0.18
FN1-210ENST00000438981 NUP160Q12769 1436 aa13.94□□□□□ -0.18
FN1-210ENST00000438981 RUSC2Q8N2Y8 1516 aa13.94□□□□□ -0.18
FN1-210ENST00000438981 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
FN1-210ENST00000438981 KIF27Q86VH2 1401 aa13.9□□□□□ -0.19
FN1-210ENST00000438981 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
FN1-210ENST00000438981 IGF1RP08069 1367 aa13.82□□□□□ -0.2
FN1-210ENST00000438981 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
FN1-210ENST00000438981 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms