RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
AFP-201ENST00000226359 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
AFP-201ENST00000226359 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
AFP-201ENST00000226359 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
AFP-201ENST00000226359 POTEDQ86YR6 584 aa16.52■□□□□ 0.23
AFP-201ENST00000226359 FOXD1Q16676 465 aa15.93■□□□□ 0.14
AFP-201ENST00000226359 MSH5O43196 834 aa15.46■□□□□ 0.07
AFP-201ENST00000226359 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.05
AFP-201ENST00000226359 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
AFP-201ENST00000226359 PLPPR3Q6T4P5 718 aa14.05□□□□□ -0.16
AFP-201ENST00000226359 ADRA2BP18089 450 aa14.01□□□□□ -0.17
AFP-201ENST00000226359 CACNB1Q02641 598 aaPredicted RBP13.76□□□□□ -0.21
AFP-201ENST00000226359 NISCHQ9Y2I1 1504 aa13.59□□□□□ -0.23
AFP-201ENST00000226359 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
AFP-201ENST00000226359 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
AFP-201ENST00000226359 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
AFP-201ENST00000226359 RNF39Q9H2S5 420 aa13□□□□□ -0.33
AFP-201ENST00000226359 DCAF8L1A6NGE4 600 aa12.84□□□□□ -0.35
AFP-201ENST00000226359 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
AFP-201ENST00000226359 POTEHQ6S545 545 aa12.8□□□□□ -0.36
AFP-201ENST00000226359 KCNA4P22459 653 aa12.54□□□□□ -0.4
AFP-201ENST00000226359 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
AFP-201ENST00000226359 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
AFP-201ENST00000226359 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
AFP-201ENST00000226359 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.45
AFP-201ENST00000226359 CCDC180Q9P1Z9 1646 aa12.13□□□□□ -0.47
AFP-201ENST00000226359 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
AFP-201ENST00000226359 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
AFP-201ENST00000226359 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
AFP-201ENST00000226359 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
AFP-201ENST00000226359 ABCC9O60706 1549 aa11.96□□□□□ -0.5
AFP-201ENST00000226359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.96□□□□□ -0.51e-323■□□□□ 8.6
AFP-201ENST00000226359 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
AFP-201ENST00000226359 DSG3P32926 999 aa11.82□□□□□ -0.52
AFP-201ENST00000226359 CAPN15O75808 1086 aa11.7□□□□□ -0.54
AFP-201ENST00000226359 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
AFP-201ENST00000226359 ZBTB22O15209 634 aa11.58□□□□□ -0.56
AFP-201ENST00000226359 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
AFP-201ENST00000226359 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
AFP-201ENST00000226359 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
AFP-201ENST00000226359 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
AFP-201ENST00000226359 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
AFP-201ENST00000226359 CHRDL2Q6WN34 429 aa11.47□□□□□ -0.57
AFP-201ENST00000226359 NACADO15069 1562 aa11.45□□□□□ -0.58
AFP-201ENST00000226359 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
AFP-201ENST00000226359 APLP2Q06481 763 aa11.39□□□□□ -0.59
AFP-201ENST00000226359 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
AFP-201ENST00000226359 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
AFP-201ENST00000226359 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
AFP-201ENST00000226359 ZNF219Q9P2Y4 722 aaPredicted RBP11.33□□□□□ -0.6
AFP-201ENST00000226359 ZCCHC6Q5VYS8 1495 aaKnown RBP11.31□□□□□ -0.6
AFP-201ENST00000226359 ABCB7O75027 752 aa11.27□□□□□ -0.61
AFP-201ENST00000226359 DCAF1Q9Y4B6 1507 aa11.26□□□□□ -0.61
AFP-201ENST00000226359 TRHP20396 242 aaPredicted RBP11.25□□□□□ -0.61
AFP-201ENST00000226359 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
AFP-201ENST00000226359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
AFP-201ENST00000226359 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
AFP-201ENST00000226359 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
AFP-201ENST00000226359 SHROOM4Q9ULL8 1493 aa11.07□□□□□ -0.64
AFP-201ENST00000226359 UNC13AQ9UPW8 1703 aa11.07□□□□□ -0.64
AFP-201ENST00000226359 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
AFP-201ENST00000226359 HAX1O00165 279 aa11.05□□□□□ -0.64
AFP-201ENST00000226359 BICRAQ9NZM4 1560 aa11.03□□□□□ -0.64
AFP-201ENST00000226359 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
AFP-201ENST00000226359 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
AFP-201ENST00000226359 AKT1S1Q96B36 256 aa10.96□□□□□ -0.65
AFP-201ENST00000226359 SAMD1Q6SPF0 538 aaPredicted RBP10.92□□□□□ -0.66
AFP-201ENST00000226359 PLSCR2Q9NRY7 297 aa10.92□□□□□ -0.66
AFP-201ENST00000226359 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
AFP-201ENST00000226359 RTN4Q9NQC3 1192 aaKnown RBP10.87□□□□□ -0.67
AFP-201ENST00000226359 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
AFP-201ENST00000226359 LHX8Q68G74 356 aa10.84□□□□□ -0.67
AFP-201ENST00000226359 EIF4G1Q04637 1599 aaKnown RBP10.81□□□□□ -0.68
AFP-201ENST00000226359 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
AFP-201ENST00000226359 CC2D2AQ9P2K1 1620 aa10.78□□□□□ -0.68
AFP-201ENST00000226359 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
AFP-201ENST00000226359 REM2Q8IYK8 340 aaPredicted RBP10.77□□□□□ -0.69
AFP-201ENST00000226359 POLA2Q14181 598 aa10.74□□□□□ -0.69
AFP-201ENST00000226359 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
AFP-201ENST00000226359 EVX2Q03828 476 aa10.68□□□□□ -0.7
AFP-201ENST00000226359 ZBTB12Q9Y330 459 aaPredicted RBP10.66□□□□□ -0.7
AFP-201ENST00000226359 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
AFP-201ENST00000226359 BAZ1AQ9NRL2 1556 aaPredicted RBP10.58□□□□□ -0.72
AFP-201ENST00000226359 SMARCA2P51531 1590 aa10.57□□□□□ -0.72
AFP-201ENST00000226359 SMARCA4P51532 1647 aa10.56□□□□□ -0.72
AFP-201ENST00000226359 FKBP8Q14318 412 aa10.55□□□□□ -0.72
AFP-201ENST00000226359 NCAPD3P42695 1498 aa10.54□□□□□ -0.72
AFP-201ENST00000226359 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
AFP-201ENST00000226359 GABBR2O75899 941 aa10.52□□□□□ -0.72
AFP-201ENST00000226359 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
AFP-201ENST00000226359 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
AFP-201ENST00000226359 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
AFP-201ENST00000226359 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
AFP-201ENST00000226359 MROH2BQ7Z745 1585 aa10.44□□□□□ -0.74
AFP-201ENST00000226359 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
AFP-201ENST00000226359 ERCC6Q03468 1493 aa10.4□□□□□ -0.75
AFP-201ENST00000226359 PRKAR2AP13861 404 aaKnown RBP10.39□□□□□ -0.75
AFP-201ENST00000226359 MKRN4PQ13434 485 aaPredicted RBP10.39□□□□□ -0.75
AFP-201ENST00000226359 PCDH10Q9P2E7 1040 aa10.32□□□□□ -0.76
AFP-201ENST00000226359 RSF1Q96T23 1441 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms