RNA–Protein interactions for RNA: ENST00000510181.5

COPB2-206, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 1,037 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-206ENST00000510181 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
COPB2-206ENST00000510181 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
COPB2-206ENST00000510181 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
COPB2-206ENST00000510181 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
COPB2-206ENST00000510181 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
COPB2-206ENST00000510181 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
COPB2-206ENST00000510181 FOXD1Q16676 465 aa16.82■□□□□ 0.28
COPB2-206ENST00000510181 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.19
COPB2-206ENST00000510181 ADRA2BP18089 450 aa16.11■□□□□ 0.17
COPB2-206ENST00000510181 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
COPB2-206ENST00000510181 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
COPB2-206ENST00000510181 ABCC9O60706 1549 aa15.69■□□□□ 0.1
COPB2-206ENST00000510181 MSH5O43196 834 aa15.67■□□□□ 0.1
COPB2-206ENST00000510181 ZCCHC6Q5VYS8 1495 aaKnown RBP15.36■□□□□ 0.05
COPB2-206ENST00000510181 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
COPB2-206ENST00000510181 NACADO15069 1562 aa15.24■□□□□ 0.03
COPB2-206ENST00000510181 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
COPB2-206ENST00000510181 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
COPB2-206ENST00000510181 RB1CC1Q8TDY2 1594 aa15.2■□□□□ 0.02
COPB2-206ENST00000510181 SCAF1Q9H7N4 1312 aaKnown RBP14.94□□□□□ -0.02
COPB2-206ENST00000510181 PPP4R3CPQ6ZMV5 832 aa14.92□□□□□ -0.02
COPB2-206ENST00000510181 UNC13AQ9UPW8 1703 aa14.87□□□□□ -0.03
COPB2-206ENST00000510181 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
COPB2-206ENST00000510181 BICRAQ9NZM4 1560 aa14.72□□□□□ -0.05
COPB2-206ENST00000510181 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
COPB2-206ENST00000510181 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
COPB2-206ENST00000510181 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
COPB2-206ENST00000510181 MAPK8IP2Q13387 824 aaPredicted RBP14.59□□□□□ -0.07
COPB2-206ENST00000510181 CNKSR2Q8WXI2 1034 aa14.56□□□□□ -0.08
COPB2-206ENST00000510181 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.09
COPB2-206ENST00000510181 KCNA4P22459 653 aa14.49□□□□□ -0.09
COPB2-206ENST00000510181 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
COPB2-206ENST00000510181 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
COPB2-206ENST00000510181 CECR2Q9BXF3 1484 aa14.28□□□□□ -0.12
COPB2-206ENST00000510181 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
COPB2-206ENST00000510181 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
COPB2-206ENST00000510181 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
COPB2-206ENST00000510181 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
COPB2-206ENST00000510181 POTEDQ86YR6 584 aa14.2□□□□□ -0.14
COPB2-206ENST00000510181 HOXD11P31277 338 aaPredicted RBP14.19□□□□□ -0.14
COPB2-206ENST00000510181 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
COPB2-206ENST00000510181 MROH2BQ7Z745 1585 aa14.16□□□□□ -0.14
COPB2-206ENST00000510181 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
COPB2-206ENST00000510181 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
COPB2-206ENST00000510181 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
COPB2-206ENST00000510181 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
COPB2-206ENST00000510181 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
COPB2-206ENST00000510181 WIZO95785 1651 aa14.03□□□□□ -0.16
COPB2-206ENST00000510181 HMGXB3Q12766 1538 aa14□□□□□ -0.17
COPB2-206ENST00000510181 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
COPB2-206ENST00000510181 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
COPB2-206ENST00000510181 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.19
COPB2-206ENST00000510181 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
COPB2-206ENST00000510181 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
COPB2-206ENST00000510181 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
COPB2-206ENST00000510181 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
COPB2-206ENST00000510181 CADPSQ9ULU8 1353 aa13.65□□□□□ -0.22
COPB2-206ENST00000510181 NESP48681 1621 aa13.64□□□□□ -0.23
COPB2-206ENST00000510181 CFTRP13569 1480 aa13.61□□□□□ -0.23
COPB2-206ENST00000510181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.241e-8■□□□□ 8.6
COPB2-206ENST00000510181 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
COPB2-206ENST00000510181 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
COPB2-206ENST00000510181 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
COPB2-206ENST00000510181 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
COPB2-206ENST00000510181 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
COPB2-206ENST00000510181 CEP164Q9UPV0 1460 aa13.46□□□□□ -0.25
COPB2-206ENST00000510181 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
COPB2-206ENST00000510181 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
COPB2-206ENST00000510181 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
COPB2-206ENST00000510181 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
COPB2-206ENST00000510181 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
COPB2-206ENST00000510181 WDR62O43379 1518 aa13.35□□□□□ -0.27
COPB2-206ENST00000510181 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
COPB2-206ENST00000510181 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
COPB2-206ENST00000510181 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
COPB2-206ENST00000510181 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
COPB2-206ENST00000510181 CUX2O14529 1486 aa13.31□□□□□ -0.28
COPB2-206ENST00000510181 TOPBP1Q92547 1522 aa13.31□□□□□ -0.28
COPB2-206ENST00000510181 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
COPB2-206ENST00000510181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
COPB2-206ENST00000510181 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
COPB2-206ENST00000510181 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
COPB2-206ENST00000510181 CUX1P39880 1505 aa13.28□□□□□ -0.28
COPB2-206ENST00000510181 ZBTB22O15209 634 aa13.27□□□□□ -0.29
COPB2-206ENST00000510181 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.29
COPB2-206ENST00000510181 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
COPB2-206ENST00000510181 TOP2BQ02880 1626 aa13.23□□□□□ -0.29
COPB2-206ENST00000510181 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
COPB2-206ENST00000510181 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
COPB2-206ENST00000510181 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
COPB2-206ENST00000510181 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
COPB2-206ENST00000510181 FGD5Q6ZNL6 1462 aa13.2□□□□□ -0.3
COPB2-206ENST00000510181 APLP2Q06481 763 aa13.19□□□□□ -0.3
COPB2-206ENST00000510181 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
COPB2-206ENST00000510181 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
COPB2-206ENST00000510181 SOGA1O94964 1423 aa13.15□□□□□ -0.3
COPB2-206ENST00000510181 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
COPB2-206ENST00000510181 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
COPB2-206ENST00000510181 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
COPB2-206ENST00000510181 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms