RNA–Protein interactions for RNA: ENST00000473021.1

P4HB-208, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 1 (best)

Gene P4HB, Length 914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-208ENST00000473021 NISCHQ9Y2I1 1504 aa37.45■■■■□ 3.59
P4HB-208ENST00000473021 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
P4HB-208ENST00000473021 ABCC9O60706 1549 aa31.75■■■□□ 2.67
P4HB-208ENST00000473021 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
P4HB-208ENST00000473021 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
P4HB-208ENST00000473021 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
P4HB-208ENST00000473021 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
P4HB-208ENST00000473021 NACADO15069 1562 aa30.9■■■□□ 2.54
P4HB-208ENST00000473021 RB1CC1Q8TDY2 1594 aa30.77■■■□□ 2.52
P4HB-208ENST00000473021 SCRIBQ14160 1630 aa30.14■■■□□ 2.42
P4HB-208ENST00000473021 UNC13AQ9UPW8 1703 aa29.98■■■□□ 2.39
P4HB-208ENST00000473021 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.39
P4HB-208ENST00000473021 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
P4HB-208ENST00000473021 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
P4HB-208ENST00000473021 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
P4HB-208ENST00000473021 EIF4G1Q04637 1599 aaKnown RBP28.99■■■□□ 2.23
P4HB-208ENST00000473021 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
P4HB-208ENST00000473021 SMARCA4P51532 1647 aa28.9■■■□□ 2.22
P4HB-208ENST00000473021 MROH2BQ7Z745 1585 aa28.87■■■□□ 2.21
P4HB-208ENST00000473021 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
P4HB-208ENST00000473021 CC2D2AQ9P2K1 1620 aa28.71■■■□□ 2.19
P4HB-208ENST00000473021 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.17
P4HB-208ENST00000473021 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
P4HB-208ENST00000473021 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
P4HB-208ENST00000473021 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
P4HB-208ENST00000473021 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
P4HB-208ENST00000473021 WIZO95785 1651 aa28.54■■■□□ 2.16
P4HB-208ENST00000473021 SUPT5HO00267 1087 aaKnown RBP28.5■■■□□ 2.15
P4HB-208ENST00000473021 BAZ1BQ9UIG0 1483 aaKnown RBP28.42■■■□□ 2.14
P4HB-208ENST00000473021 HMGXB3Q12766 1538 aa28.42■■■□□ 2.14
P4HB-208ENST00000473021 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
P4HB-208ENST00000473021 CCDC88BA6NC98 1476 aa28■■■□□ 2.07
P4HB-208ENST00000473021 CADPSQ9ULU8 1353 aa27.74■■■□□ 2.03
P4HB-208ENST00000473021 CFTRP13569 1480 aa27.7■■■□□ 2.02
P4HB-208ENST00000473021 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
P4HB-208ENST00000473021 NESP48681 1621 aa27.64■■■□□ 2.02
P4HB-208ENST00000473021 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
P4HB-208ENST00000473021 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
P4HB-208ENST00000473021 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
P4HB-208ENST00000473021 ERCC6Q03468 1493 aa27.31■■□□□ 1.96
P4HB-208ENST00000473021 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
P4HB-208ENST00000473021 KIF21AQ7Z4S6 1674 aa27.26■■□□□ 1.95
P4HB-208ENST00000473021 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
P4HB-208ENST00000473021 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
P4HB-208ENST00000473021 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
P4HB-208ENST00000473021 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
P4HB-208ENST00000473021 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
P4HB-208ENST00000473021 CUX1P39880 1505 aa27.05■■□□□ 1.92
P4HB-208ENST00000473021 WDR62O43379 1518 aa27.03■■□□□ 1.92
P4HB-208ENST00000473021 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
P4HB-208ENST00000473021 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
P4HB-208ENST00000473021 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
P4HB-208ENST00000473021 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
P4HB-208ENST00000473021 TOP2BQ02880 1626 aa26.95■■□□□ 1.91
P4HB-208ENST00000473021 BIVM-ERCC5R4GMW8 1640 aa26.92■■□□□ 1.9
P4HB-208ENST00000473021 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
P4HB-208ENST00000473021 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
P4HB-208ENST00000473021 POLA1P09884 1462 aaPredicted RBP26.84■■□□□ 1.89
P4HB-208ENST00000473021 CUX2O14529 1486 aa26.81■■□□□ 1.88
P4HB-208ENST00000473021 SOGA1O94964 1423 aa26.76■■□□□ 1.87
P4HB-208ENST00000473021 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
P4HB-208ENST00000473021 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
P4HB-208ENST00000473021 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
P4HB-208ENST00000473021 ABCA10Q8WWZ4 1543 aa26.64■■□□□ 1.85
P4HB-208ENST00000473021 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
P4HB-208ENST00000473021 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
P4HB-208ENST00000473021 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
P4HB-208ENST00000473021 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
P4HB-208ENST00000473021 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.836e-19■■■■■ 27.6
P4HB-208ENST00000473021 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
P4HB-208ENST00000473021 ABCA5Q8WWZ7 1642 aa26.44■■□□□ 1.82
P4HB-208ENST00000473021 RUSC2Q8N2Y8 1516 aa26.43■■□□□ 1.82
P4HB-208ENST00000473021 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
P4HB-208ENST00000473021 EEA1Q15075 1411 aa26.39■■□□□ 1.82
P4HB-208ENST00000473021 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
P4HB-208ENST00000473021 IGF1RP08069 1367 aa26.34■■□□□ 1.81
P4HB-208ENST00000473021 FAM9AQ8IZU1 332 aaPredicted RBP26.32■■□□□ 1.8
P4HB-208ENST00000473021 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
P4HB-208ENST00000473021 CSRNP3Q8WYN3 585 aa26.29■■□□□ 1.8
P4HB-208ENST00000473021 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
P4HB-208ENST00000473021 SNAPC4Q5SXM2 1469 aa26.24■■□□□ 1.79
P4HB-208ENST00000473021 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
P4HB-208ENST00000473021 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
P4HB-208ENST00000473021 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
P4HB-208ENST00000473021 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
P4HB-208ENST00000473021 CUL7Q14999 1698 aa26.15■■□□□ 1.78
P4HB-208ENST00000473021 PRXQ9BXM0 1461 aa26.15■■□□□ 1.78
P4HB-208ENST00000473021 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
P4HB-208ENST00000473021 RAPGEF2Q9Y4G8 1499 aa26.09■■□□□ 1.77
P4HB-208ENST00000473021 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
P4HB-208ENST00000473021 FBLN2P98095 1184 aa26.05■■□□□ 1.76
P4HB-208ENST00000473021 KIF21BO75037 1637 aa26.03■■□□□ 1.76
P4HB-208ENST00000473021 GRIN2AQ12879 1464 aa26.03■■□□□ 1.76
P4HB-208ENST00000473021 GOLGA3Q08378 1498 aa25.96■■□□□ 1.75
P4HB-208ENST00000473021 CHD1O14646 1710 aa25.93■■□□□ 1.74
P4HB-208ENST00000473021 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
P4HB-208ENST00000473021 NUP160Q12769 1436 aa25.9■■□□□ 1.74
P4HB-208ENST00000473021 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
P4HB-208ENST00000473021 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
P4HB-208ENST00000473021 CEP170Q5SW79 1584 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms