RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
COPB2-213ENST00000515006 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
COPB2-213ENST00000515006 CHIC1Q5VXU3 224 aa11.51□□□□□ -0.57
COPB2-213ENST00000515006 ZCCHC6Q5VYS8 1495 aaKnown RBP11.27□□□□□ -0.6
COPB2-213ENST00000515006 DCAF8L2P0C7V8 631 aa11.24□□□□□ -0.61
COPB2-213ENST00000515006 DCAF1Q9Y4B6 1507 aa11.2□□□□□ -0.62
COPB2-213ENST00000515006 ABCC9O60706 1549 aa11.19□□□□□ -0.62
COPB2-213ENST00000515006 MYO15BQ96JP2 1530 aa11.14□□□□□ -0.63
COPB2-213ENST00000515006 NACADO15069 1562 aa11.05□□□□□ -0.64
COPB2-213ENST00000515006 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
COPB2-213ENST00000515006 AEBP2Q6ZN18 517 aaPredicted RBP10.92□□□□□ -0.66
COPB2-213ENST00000515006 SHROOM4Q9ULL8 1493 aa10.87□□□□□ -0.67
COPB2-213ENST00000515006 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
COPB2-213ENST00000515006 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
COPB2-213ENST00000515006 BICRAQ9NZM4 1560 aa10.51□□□□□ -0.73
COPB2-213ENST00000515006 SUPT5HO00267 1087 aaKnown RBP10.5□□□□□ -0.73
COPB2-213ENST00000515006 UNC13AQ9UPW8 1703 aa10.47□□□□□ -0.73
COPB2-213ENST00000515006 BAZ1AQ9NRL2 1556 aaPredicted RBP10.43□□□□□ -0.74
COPB2-213ENST00000515006 RSF1Q96T23 1441 aaPredicted RBP10.42□□□□□ -0.74
COPB2-213ENST00000515006 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
COPB2-213ENST00000515006 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
COPB2-213ENST00000515006 SMARCA4P51532 1647 aa10.32□□□□□ -0.76
COPB2-213ENST00000515006 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
COPB2-213ENST00000515006 EIF4G1Q04637 1599 aaKnown RBP10.25□□□□□ -0.77
COPB2-213ENST00000515006 PEG3Q9GZU2 1588 aa10.25□□□□□ -0.77
COPB2-213ENST00000515006 ATAD2BQ9ULI0 1458 aa10.24□□□□□ -0.77
COPB2-213ENST00000515006 NCAPD3P42695 1498 aa10.23□□□□□ -0.77
COPB2-213ENST00000515006 WIZO95785 1651 aa10.19□□□□□ -0.78
COPB2-213ENST00000515006 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
COPB2-213ENST00000515006 TOP2AP11388 1531 aaKnown RBP10.18□□□□□ -0.78
COPB2-213ENST00000515006 HMGXB3Q12766 1538 aa10.15□□□□□ -0.78
COPB2-213ENST00000515006 PHF23Q9BUL5 403 aaPredicted RBP10.11□□□□□ -0.79
COPB2-213ENST00000515006 CC2D2AQ9P2K1 1620 aa10.1□□□□□ -0.79
COPB2-213ENST00000515006 CCDC88BA6NC98 1476 aa10.1□□□□□ -0.79
COPB2-213ENST00000515006 CADPSQ9ULU8 1353 aa9.97□□□□□ -0.81
COPB2-213ENST00000515006 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
COPB2-213ENST00000515006 DNAJC5BQ9UF47 199 aa9.95□□□□□ -0.82
COPB2-213ENST00000515006 CFTRP13569 1480 aa9.94□□□□□ -0.82
COPB2-213ENST00000515006 PDS5BQ9NTI5 1447 aa9.87□□□□□ -0.83
COPB2-213ENST00000515006 WRNQ14191 1432 aaPredicted RBP eCLIP9.85□□□□□ -0.83
COPB2-213ENST00000515006 LAMC3Q9Y6N6 1575 aa9.84□□□□□ -0.83
COPB2-213ENST00000515006 EHMT2Q96KQ7 1210 aa9.82□□□□□ -0.84
COPB2-213ENST00000515006 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
COPB2-213ENST00000515006 PLPPR3Q6T4P5 718 aa9.8□□□□□ -0.84
COPB2-213ENST00000515006 ABCC8Q09428 1581 aa9.79□□□□□ -0.84
COPB2-213ENST00000515006 CEP164Q9UPV0 1460 aa9.76□□□□□ -0.85
COPB2-213ENST00000515006 NESP48681 1621 aa9.74□□□□□ -0.85
COPB2-213ENST00000515006 EEA1Q15075 1411 aa9.74□□□□□ -0.85
COPB2-213ENST00000515006 TOP2BQ02880 1626 aa9.71□□□□□ -0.86
COPB2-213ENST00000515006 PRDM2Q13029 1718 aa9.7□□□□□ -0.86
COPB2-213ENST00000515006 ERCC6Q03468 1493 aa9.69□□□□□ -0.86
COPB2-213ENST00000515006 CSRNP3Q8WYN3 585 aa9.69□□□□□ -0.86
COPB2-213ENST00000515006 CUX1P39880 1505 aa9.68□□□□□ -0.86
COPB2-213ENST00000515006 FAM9AQ8IZU1 332 aaPredicted RBP9.67□□□□□ -0.86
COPB2-213ENST00000515006 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
COPB2-213ENST00000515006 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
COPB2-213ENST00000515006 BIVM-ERCC5R4GMW8 1640 aa9.66□□□□□ -0.86
COPB2-213ENST00000515006 TOPBP1Q92547 1522 aa9.66□□□□□ -0.86
COPB2-213ENST00000515006 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
COPB2-213ENST00000515006 KIF27Q86VH2 1401 aa9.65□□□□□ -0.86
COPB2-213ENST00000515006 SOGA1O94964 1423 aa9.65□□□□□ -0.87
COPB2-213ENST00000515006 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
COPB2-213ENST00000515006 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
COPB2-213ENST00000515006 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
COPB2-213ENST00000515006 ABCA10Q8WWZ4 1543 aa9.58□□□□□ -0.88
COPB2-213ENST00000515006 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
COPB2-213ENST00000515006 CUX2O14529 1486 aa9.58□□□□□ -0.88
COPB2-213ENST00000515006 WDR62O43379 1518 aa9.56□□□□□ -0.88
COPB2-213ENST00000515006 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
COPB2-213ENST00000515006 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
COPB2-213ENST00000515006 KIF21AQ7Z4S6 1674 aa9.55□□□□□ -0.88
COPB2-213ENST00000515006 IGF1RP08069 1367 aa9.55□□□□□ -0.88
COPB2-213ENST00000515006 RAD54L2Q9Y4B4 1467 aa9.54□□□□□ -0.88
COPB2-213ENST00000515006 RUSC2Q8N2Y8 1516 aa9.54□□□□□ -0.88
COPB2-213ENST00000515006 CARMIL1Q5VZK9 1371 aa9.52□□□□□ -0.88
COPB2-213ENST00000515006 GOLGA3Q08378 1498 aa9.52□□□□□ -0.89
COPB2-213ENST00000515006 TDRD9Q8NDG6 1382 aaKnown RBP9.51□□□□□ -0.89
COPB2-213ENST00000515006 TNIKQ9UKE5 1360 aa9.51□□□□□ -0.89
COPB2-213ENST00000515006 GAPVD1Q14C86 1478 aa9.51□□□□□ -0.89
COPB2-213ENST00000515006 PRXQ9BXM0 1461 aa9.5□□□□□ -0.89
COPB2-213ENST00000515006 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
COPB2-213ENST00000515006 THOC2Q8NI27 1593 aaKnown RBP9.48□□□□□ -0.89
COPB2-213ENST00000515006 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
COPB2-213ENST00000515006 ERICH3Q5RHP9 1530 aa9.47□□□□□ -0.89
COPB2-213ENST00000515006 KIF21BO75037 1637 aa9.47□□□□□ -0.89
COPB2-213ENST00000515006 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
COPB2-213ENST00000515006 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
COPB2-213ENST00000515006 FHAD1B1AJZ9 1412 aa9.44□□□□□ -0.9
COPB2-213ENST00000515006 AQRO60306 1485 aaKnown RBP eCLIP9.44□□□□□ -0.91e-6■■□□□ 12.6
COPB2-213ENST00000515006 SLC24A1O60721 1099 aa9.42□□□□□ -0.9
COPB2-213ENST00000515006 CHMP7Q8WUX9 453 aaPredicted RBP9.41□□□□□ -0.9
COPB2-213ENST00000515006 CUL7Q14999 1698 aa9.41□□□□□ -0.9
COPB2-213ENST00000515006 ABCA5Q8WWZ7 1642 aa9.41□□□□□ -0.9
COPB2-213ENST00000515006 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.91
COPB2-213ENST00000515006 MAGI1Q96QZ7 1491 aaPredicted RBP9.4□□□□□ -0.91
COPB2-213ENST00000515006 CEP162Q5TB80 1403 aa9.38□□□□□ -0.91
COPB2-213ENST00000515006 CLIP1P30622 1438 aa9.37□□□□□ -0.91
COPB2-213ENST00000515006 FBLN2P98095 1184 aa9.36□□□□□ -0.91
COPB2-213ENST00000515006 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
COPB2-213ENST00000515006 APLP2Q06481 763 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms