RNA–Protein interactions for RNA: ENST00000548169.2

ATP2A2-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 2

Gene ATP2A2, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-207ENST00000548169 SLC24A1O60721 1099 aa17.98■□□□□ 0.47
ATP2A2-207ENST00000548169 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.4
ATP2A2-207ENST00000548169 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
ATP2A2-207ENST00000548169 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
ATP2A2-207ENST00000548169 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
ATP2A2-207ENST00000548169 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
ATP2A2-207ENST00000548169 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
ATP2A2-207ENST00000548169 DAXXQ9UER7 740 aaPredicted RBP16.13■□□□□ 0.17
ATP2A2-207ENST00000548169 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
ATP2A2-207ENST00000548169 KCNA4P22459 653 aa15.79■□□□□ 0.12
ATP2A2-207ENST00000548169 PRKCSHP14314 528 aaPredicted RBP15.78■□□□□ 0.12
ATP2A2-207ENST00000548169 AMER1Q5JTC6 1135 aaPredicted RBP15.69■□□□□ 0.1
ATP2A2-207ENST00000548169 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
ATP2A2-207ENST00000548169 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
ATP2A2-207ENST00000548169 CCDC180Q9P1Z9 1646 aa15.51■□□□□ 0.07
ATP2A2-207ENST00000548169 TIMELESSQ9UNS1 1208 aa15.36■□□□□ 0.05
ATP2A2-207ENST00000548169 APLP2Q06481 763 aa15.29■□□□□ 0.04
ATP2A2-207ENST00000548169 ARXQ96QS3 562 aa15.18■□□□□ 0.02
ATP2A2-207ENST00000548169 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
ATP2A2-207ENST00000548169 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
ATP2A2-207ENST00000548169 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
ATP2A2-207ENST00000548169 TAOK2Q9UL54 1235 aa15.05■□□□□ 0
ATP2A2-207ENST00000548169 ERICH6Q7L0X2 663 aa15□□□□□ -0.01
ATP2A2-207ENST00000548169 MYT1Q01538 1121 aa14.97□□□□□ -0.01
ATP2A2-207ENST00000548169 TPRNQ4KMQ1 711 aa14.87□□□□□ -0.03
ATP2A2-207ENST00000548169 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
ATP2A2-207ENST00000548169 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
ATP2A2-207ENST00000548169 RANGAP1P46060 587 aaPredicted RBP14.77□□□□□ -0.04
ATP2A2-207ENST00000548169 HOMEZQ8IX15 550 aa14.76□□□□□ -0.05
ATP2A2-207ENST00000548169 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
ATP2A2-207ENST00000548169 BCANQ96GW7 911 aa14.73□□□□□ -0.05
ATP2A2-207ENST00000548169 PODXL2Q9NZ53 605 aa14.65□□□□□ -0.06
ATP2A2-207ENST00000548169 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
ATP2A2-207ENST00000548169 ABCC9O60706 1549 aa14.61□□□□□ -0.07
ATP2A2-207ENST00000548169 PLCB2Q00722 1185 aa14.57□□□□□ -0.08
ATP2A2-207ENST00000548169 GTF3C3Q9Y5Q9 886 aa14.52□□□□□ -0.09
ATP2A2-207ENST00000548169 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
ATP2A2-207ENST00000548169 HAP1P54257 671 aaPredicted RBP14.5□□□□□ -0.09
ATP2A2-207ENST00000548169 EIF5BO60841 1220 aaKnown RBP14.46□□□□□ -0.09
ATP2A2-207ENST00000548169 NACADO15069 1562 aa14.42□□□□□ -0.1
ATP2A2-207ENST00000548169 ZBTB22O15209 634 aa14.42□□□□□ -0.1
ATP2A2-207ENST00000548169 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
ATP2A2-207ENST00000548169 RB1CC1Q8TDY2 1594 aa14.32□□□□□ -0.12
ATP2A2-207ENST00000548169 ADRA2BP18089 450 aa14.32□□□□□ -0.12
ATP2A2-207ENST00000548169 NPM2Q86SE8 214 aaKnown RBP14.25□□□□□ -0.13
ATP2A2-207ENST00000548169 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
ATP2A2-207ENST00000548169 TMEM132AQ24JP5 1023 aa14.19□□□□□ -0.14
ATP2A2-207ENST00000548169 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
ATP2A2-207ENST00000548169 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
ATP2A2-207ENST00000548169 UNC13AQ9UPW8 1703 aa14.08□□□□□ -0.16
ATP2A2-207ENST00000548169 TRIM26Q12899 539 aaPredicted RBP14.07□□□□□ -0.16
ATP2A2-207ENST00000548169 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
ATP2A2-207ENST00000548169 SUPT5HO00267 1087 aaKnown RBP14.05□□□□□ -0.16
ATP2A2-207ENST00000548169 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
ATP2A2-207ENST00000548169 FKBP8Q14318 412 aa14.04□□□□□ -0.16
ATP2A2-207ENST00000548169 FBLN2P98095 1184 aa14□□□□□ -0.17
ATP2A2-207ENST00000548169 VSIG10Q8N0Z9 540 aa13.95□□□□□ -0.18
ATP2A2-207ENST00000548169 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
ATP2A2-207ENST00000548169 UBTFP17480 764 aaKnown RBP13.92□□□□□ -0.18
ATP2A2-207ENST00000548169 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
ATP2A2-207ENST00000548169 HRCP23327 699 aa13.88□□□□□ -0.19
ATP2A2-207ENST00000548169 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
ATP2A2-207ENST00000548169 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
ATP2A2-207ENST00000548169 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATP2A2-207ENST00000548169 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
ATP2A2-207ENST00000548169 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
ATP2A2-207ENST00000548169 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
ATP2A2-207ENST00000548169 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
ATP2A2-207ENST00000548169 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
ATP2A2-207ENST00000548169 RSF1Q96T23 1441 aaPredicted RBP13.53□□□□□ -0.24
ATP2A2-207ENST00000548169 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
ATP2A2-207ENST00000548169 EIF4G1Q04637 1599 aaKnown RBP13.46□□□□□ -0.26
ATP2A2-207ENST00000548169 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
ATP2A2-207ENST00000548169 WIZO95785 1651 aa13.44□□□□□ -0.26
ATP2A2-207ENST00000548169 IGSF3O75054 1194 aa13.41□□□□□ -0.26
ATP2A2-207ENST00000548169 PDIA4P13667 645 aaKnown RBP13.41□□□□□ -0.26
ATP2A2-207ENST00000548169 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
ATP2A2-207ENST00000548169 SAMD1Q6SPF0 538 aaPredicted RBP13.35□□□□□ -0.27
ATP2A2-207ENST00000548169 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
ATP2A2-207ENST00000548169 CFAP44Q96MT7 982 aa13.35□□□□□ -0.27
ATP2A2-207ENST00000548169 ATAD2BQ9ULI0 1458 aa13.34□□□□□ -0.27
ATP2A2-207ENST00000548169 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
ATP2A2-207ENST00000548169 BCL11AQ9H165 835 aa13.34□□□□□ -0.27
ATP2A2-207ENST00000548169 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
ATP2A2-207ENST00000548169 TOP2AP11388 1531 aaKnown RBP13.33□□□□□ -0.28
ATP2A2-207ENST00000548169 DHX37Q8IY37 1157 aaKnown RBP13.32□□□□□ -0.28
ATP2A2-207ENST00000548169 NBR1Q14596 966 aa13.3□□□□□ -0.28
ATP2A2-207ENST00000548169 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
ATP2A2-207ENST00000548169 CC2D2AQ9P2K1 1620 aa13.3□□□□□ -0.28
ATP2A2-207ENST00000548169 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
ATP2A2-207ENST00000548169 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
ATP2A2-207ENST00000548169 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
ATP2A2-207ENST00000548169 CDK11BP21127 795 aaKnown RBP13.26□□□□□ -0.29
ATP2A2-207ENST00000548169 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
ATP2A2-207ENST00000548169 BAZ1BQ9UIG0 1483 aaKnown RBP13.24□□□□□ -0.29
ATP2A2-207ENST00000548169 ARID3AQ99856 593 aa13.24□□□□□ -0.29
ATP2A2-207ENST00000548169 UBE2Q2Q8WVN8 375 aa13.2□□□□□ -0.3
ATP2A2-207ENST00000548169 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
ATP2A2-207ENST00000548169 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
ATP2A2-207ENST00000548169 CCDC88BA6NC98 1476 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms