Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.45■□□□□ 0.22
RIPK2O43353 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RIPK2O43353 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RIPK2O43353 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RIPK2O43353 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.44■□□□□ 0.22
RIPK2O43353 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RIPK2O43353 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RIPK2O43353 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.44■□□□□ 0.22
RIPK2O43353 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.44■□□□□ 0.22
RIPK2O43353 MIR4515-201ENST00000584082 81 ntBASIC16.44■□□□□ 0.22
RIPK2O43353 AL031055.1-201ENST00000606362 631 ntBASIC16.44■□□□□ 0.22
RIPK2O43353 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.44■□□□□ 0.22
RIPK2O43353 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.44■□□□□ 0.22
RIPK2O43353 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.44■□□□□ 0.22
RIPK2O43353 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.44■□□□□ 0.22
RIPK2O43353 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.44■□□□□ 0.22
RIPK2O43353 AC007292.2-201ENST00000593524 1812 ntBASIC16.44■□□□□ 0.22
RIPK2O43353 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.44■□□□□ 0.22
RIPK2O43353 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RIPK2O43353 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RIPK2O43353 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RIPK2O43353 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RIPK2O43353 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RIPK2O43353 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 AC009090.5-201ENST00000624886 2285 ntBASIC16.43■□□□□ 0.22
RIPK2O43353 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RIPK2O43353 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.43■□□□□ 0.22
RIPK2O43353 HMGA1P7-201ENST00000406908 502 ntBASIC16.43■□□□□ 0.22
RIPK2O43353 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.43■□□□□ 0.22
RIPK2O43353 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 IGHV3-65-201ENST00000523210 341 ntBASIC16.43■□□□□ 0.22
RIPK2O43353 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 ACTL9-202ENST00000612068 1252 ntBASIC16.43■□□□□ 0.22
RIPK2O43353 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.43■□□□□ 0.22
RIPK2O43353 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RIPK2O43353 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.43■□□□□ 0.22
RIPK2O43353 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RIPK2O43353 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.43■□□□□ 0.22
RIPK2O43353 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RIPK2O43353 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.43■□□□□ 0.22
RIPK2O43353 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIPK2O43353 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.42■□□□□ 0.22
RIPK2O43353 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.42■□□□□ 0.22
RIPK2O43353 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
RIPK2O43353 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
RIPK2O43353 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms