Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.16■□□□□ 0.02
NR4A1P22736 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NR4A1P22736 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.16■□□□□ 0.02
NR4A1P22736 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR4A1P22736 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.16■□□□□ 0.02
NR4A1P22736 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NR4A1P22736 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NR4A1P22736 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.15■□□□□ 0.02
NR4A1P22736 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 AP002469.2-201ENST00000531724 424 ntBASIC15.15■□□□□ 0.02
NR4A1P22736 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.15■□□□□ 0.02
NR4A1P22736 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
NR4A1P22736 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.15■□□□□ 0.02
NR4A1P22736 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 AC064862.7-201ENST00000604520 867 ntBASIC15.15■□□□□ 0.02
NR4A1P22736 AC073592.5-201ENST00000624854 528 ntBASIC15.15■□□□□ 0.02
NR4A1P22736 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.15■□□□□ 0.02
NR4A1P22736 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NR4A1P22736 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.15■□□□□ 0.02
NR4A1P22736 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A1P22736 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NR4A1P22736 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NR4A1P22736 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.14■□□□□ 0.01
NR4A1P22736 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 GPR89P-201ENST00000407924 1495 ntBASIC15.14■□□□□ 0.01
NR4A1P22736 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.14■□□□□ 0.01
NR4A1P22736 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NR4A1P22736 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NR4A1P22736 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NR4A1P22736 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NR4A1P22736 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 MYCLP1-201ENST00000372451 1075 ntBASIC15.14■□□□□ 0.01
NR4A1P22736 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.14■□□□□ 0.01
NR4A1P22736 FAM197Y8-203ENST00000450145 560 ntBASIC15.14■□□□□ 0.01
NR4A1P22736 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NR4A1P22736 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NR4A1P22736 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 AL139288.1-201ENST00000623748 933 ntBASIC15.14■□□□□ 0.01
NR4A1P22736 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 GGT4P-201ENST00000623672 1708 ntBASIC15.14■□□□□ 0.01
NR4A1P22736 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.14■□□□□ 0.01
NR4A1P22736 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A1P22736 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A1P22736 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms