Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
SNIP1Q8TAD8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
SNIP1Q8TAD8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNIP1Q8TAD8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SNIP1Q8TAD8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNIP1Q8TAD8 UNC93B3-201ENST00000308076 687 ntBASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 AL449106.1-201ENST00000608517 1980 ntBASIC22.38■■□□□ 1.17
SNIP1Q8TAD8 EDA-201ENST00000338901 1233 ntBASIC22.37■■□□□ 1.17
SNIP1Q8TAD8 AL136162.1-201ENST00000607711 1078 ntBASIC22.37■■□□□ 1.17
SNIP1Q8TAD8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.37■■□□□ 1.17
SNIP1Q8TAD8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNIP1Q8TAD8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNIP1Q8TAD8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNIP1Q8TAD8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNIP1Q8TAD8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.36■■□□□ 1.17
SNIP1Q8TAD8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNIP1Q8TAD8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
SNIP1Q8TAD8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.35■■□□□ 1.17
SNIP1Q8TAD8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.35■■□□□ 1.17
SNIP1Q8TAD8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 AL355001.2-201ENST00000620617 1191 ntBASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
SNIP1Q8TAD8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SNIP1Q8TAD8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SNIP1Q8TAD8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SNIP1Q8TAD8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
SNIP1Q8TAD8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.33■■□□□ 1.16
SNIP1Q8TAD8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SNIP1Q8TAD8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
SNIP1Q8TAD8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNIP1Q8TAD8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNIP1Q8TAD8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SNIP1Q8TAD8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNIP1Q8TAD8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SNIP1Q8TAD8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNIP1Q8TAD8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNIP1Q8TAD8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNIP1Q8TAD8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.31■■□□□ 1.16
SNIP1Q8TAD8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.31■■□□□ 1.16
SNIP1Q8TAD8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.31■■□□□ 1.16
SNIP1Q8TAD8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SNIP1Q8TAD8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNIP1Q8TAD8 BX255925.1-201ENST00000566954 1854 ntBASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 AF131216.4-201ENST00000638924 1588 ntBASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNIP1Q8TAD8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNIP1Q8TAD8 AC105265.2-201ENST00000467189 838 ntBASIC22.29■■□□□ 1.16
SNIP1Q8TAD8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.29■■□□□ 1.16
SNIP1Q8TAD8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.29■■□□□ 1.16
SNIP1Q8TAD8 MIR6821-201ENST00000617625 74 ntBASIC22.29■■□□□ 1.16
SNIP1Q8TAD8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNIP1Q8TAD8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SNIP1Q8TAD8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNIP1Q8TAD8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.27■■□□□ 1.16
SNIP1Q8TAD8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.27■■□□□ 1.16
SNIP1Q8TAD8 AC024257.2-201ENST00000549699 147 ntBASIC22.27■■□□□ 1.16
SNIP1Q8TAD8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SNIP1Q8TAD8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.27■■□□□ 1.16
SNIP1Q8TAD8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNIP1Q8TAD8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SNIP1Q8TAD8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SNIP1Q8TAD8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNIP1Q8TAD8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms