Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM60Q495X7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM60Q495X7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM60Q495X7 AL136162.1-201ENST00000607711 1078 ntBASIC26.27■■□□□ 1.8
TRIM60Q495X7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM60Q495X7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM60Q495X7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM60Q495X7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM60Q495X7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.26■■□□□ 1.79
TRIM60Q495X7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM60Q495X7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TRIM60Q495X7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM60Q495X7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
TRIM60Q495X7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.25■■□□□ 1.79
TRIM60Q495X7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.25■■□□□ 1.79
TRIM60Q495X7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM60Q495X7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.25■■□□□ 1.79
TRIM60Q495X7 DRD5P2-201ENST00000421395 2012 ntBASIC26.25■■□□□ 1.79
TRIM60Q495X7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM60Q495X7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
TRIM60Q495X7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TRIM60Q495X7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM60Q495X7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM60Q495X7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM60Q495X7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM60Q495X7 LINC01003-201ENST00000564834 1764 ntBASIC26.23■■□□□ 1.79
TRIM60Q495X7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM60Q495X7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TRIM60Q495X7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM60Q495X7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM60Q495X7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM60Q495X7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM60Q495X7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM60Q495X7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.22■■□□□ 1.79
TRIM60Q495X7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
TRIM60Q495X7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM60Q495X7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM60Q495X7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM60Q495X7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
TRIM60Q495X7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM60Q495X7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM60Q495X7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
TRIM60Q495X7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.2■■□□□ 1.78
TRIM60Q495X7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.2■■□□□ 1.78
TRIM60Q495X7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.2■■□□□ 1.78
TRIM60Q495X7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.2■■□□□ 1.78
TRIM60Q495X7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM60Q495X7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
TRIM60Q495X7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM60Q495X7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TRIM60Q495X7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM60Q495X7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM60Q495X7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM60Q495X7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM60Q495X7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.18■■□□□ 1.78
TRIM60Q495X7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM60Q495X7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM60Q495X7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM60Q495X7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM60Q495X7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
TRIM60Q495X7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM60Q495X7 AC024257.2-201ENST00000549699 147 ntBASIC26.17■■□□□ 1.78
TRIM60Q495X7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM60Q495X7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
TRIM60Q495X7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM60Q495X7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM60Q495X7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM60Q495X7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM60Q495X7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.16■■□□□ 1.78
TRIM60Q495X7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.16■■□□□ 1.78
TRIM60Q495X7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
TRIM60Q495X7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM60Q495X7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM60Q495X7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.16■■□□□ 1.78
TRIM60Q495X7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM60Q495X7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM60Q495X7 EDA-201ENST00000338901 1233 ntBASIC26.15■■□□□ 1.78
TRIM60Q495X7 AC105265.2-201ENST00000467189 838 ntBASIC26.15■■□□□ 1.78
TRIM60Q495X7 AL355001.2-201ENST00000620617 1191 ntBASIC26.15■■□□□ 1.78
TRIM60Q495X7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.15■■□□□ 1.78
TRIM60Q495X7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
TRIM60Q495X7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
TRIM60Q495X7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
TRIM60Q495X7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM60Q495X7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM60Q495X7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
TRIM60Q495X7 SNX5-217ENST00000606557 1087 ntBASIC26.14■■□□□ 1.78
TRIM60Q495X7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM60Q495X7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM60Q495X7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM60Q495X7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
TRIM60Q495X7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM60Q495X7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM60Q495X7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM60Q495X7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.13■■□□□ 1.77
TRIM60Q495X7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM60Q495X7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.13■■□□□ 1.77
TRIM60Q495X7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
TRIM60Q495X7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM60Q495X7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms