Protein–RNA interactions for Protein: Q3MIR4

TMEM30B, Cell cycle control protein 50B, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30BQ3MIR4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM30BQ3MIR4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM30BQ3MIR4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM30BQ3MIR4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM30BQ3MIR4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TMEM30BQ3MIR4 AL139125.2-201ENST00000623134 1869 ntBASIC19.34■□□□□ 0.69
TMEM30BQ3MIR4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM30BQ3MIR4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM30BQ3MIR4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM30BQ3MIR4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM30BQ3MIR4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEM30BQ3MIR4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEM30BQ3MIR4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEM30BQ3MIR4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.33■□□□□ 0.68
TMEM30BQ3MIR4 AC087393.1-201ENST00000582896 145 ntBASIC19.33■□□□□ 0.68
TMEM30BQ3MIR4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM30BQ3MIR4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM30BQ3MIR4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM30BQ3MIR4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM30BQ3MIR4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM30BQ3MIR4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM30BQ3MIR4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM30BQ3MIR4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM30BQ3MIR4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TMEM30BQ3MIR4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM30BQ3MIR4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM30BQ3MIR4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM30BQ3MIR4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM30BQ3MIR4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM30BQ3MIR4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM30BQ3MIR4 ABHD17AP5-201ENST00000580133 923 ntBASIC19.31■□□□□ 0.68
TMEM30BQ3MIR4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM30BQ3MIR4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM30BQ3MIR4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM30BQ3MIR4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM30BQ3MIR4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM30BQ3MIR4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM30BQ3MIR4 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM30BQ3MIR4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM30BQ3MIR4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TMEM30BQ3MIR4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM30BQ3MIR4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM30BQ3MIR4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM30BQ3MIR4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM30BQ3MIR4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM30BQ3MIR4 AL592295.1-201ENST00000400984 884 ntBASIC19.29■□□□□ 0.68
TMEM30BQ3MIR4 DUX4L9-201ENST00000449051 1259 ntBASIC19.29■□□□□ 0.68
TMEM30BQ3MIR4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
TMEM30BQ3MIR4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM30BQ3MIR4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM30BQ3MIR4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM30BQ3MIR4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.28■□□□□ 0.68
TMEM30BQ3MIR4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM30BQ3MIR4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM30BQ3MIR4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM30BQ3MIR4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM30BQ3MIR4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM30BQ3MIR4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 SPCS2P3-201ENST00000500401 656 ntBASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 U85056.1-201ENST00000616429 682 ntBASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM30BQ3MIR4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM30BQ3MIR4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.27■□□□□ 0.67
TMEM30BQ3MIR4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.27■□□□□ 0.67
TMEM30BQ3MIR4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM30BQ3MIR4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM30BQ3MIR4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM30BQ3MIR4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM30BQ3MIR4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TMEM30BQ3MIR4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM30BQ3MIR4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM30BQ3MIR4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM30BQ3MIR4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 AC129492.7-201ENST00000622992 756 ntBASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 LINC00543-201ENST00000567234 1845 ntBASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM30BQ3MIR4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 NTF6A-201ENST00000591175 560 ntBASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM30BQ3MIR4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM30BQ3MIR4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM30BQ3MIR4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM30BQ3MIR4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM30BQ3MIR4 KRT18P60-201ENST00000312876 1297 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms