Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
WNT3P56703 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
WNT3P56703 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
WNT3P56703 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.38■■□□□ 1.17
WNT3P56703 NTF6A-201ENST00000591175 560 ntBASIC22.38■■□□□ 1.17
WNT3P56703 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.38■■□□□ 1.17
WNT3P56703 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
WNT3P56703 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
WNT3P56703 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
WNT3P56703 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
WNT3P56703 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.37■■□□□ 1.17
WNT3P56703 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.37■■□□□ 1.17
WNT3P56703 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.37■■□□□ 1.17
WNT3P56703 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.37■■□□□ 1.17
WNT3P56703 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
WNT3P56703 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
WNT3P56703 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.37■■□□□ 1.17
WNT3P56703 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.36■■□□□ 1.17
WNT3P56703 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
WNT3P56703 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
WNT3P56703 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
WNT3P56703 RAP2CP1-202ENST00000605179 643 ntBASIC22.36■■□□□ 1.17
WNT3P56703 U85056.1-201ENST00000616429 682 ntBASIC22.36■■□□□ 1.17
WNT3P56703 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.36■■□□□ 1.17
WNT3P56703 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
WNT3P56703 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
WNT3P56703 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.35■■□□□ 1.17
WNT3P56703 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
WNT3P56703 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
WNT3P56703 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
WNT3P56703 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
WNT3P56703 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.34■■□□□ 1.17
WNT3P56703 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
WNT3P56703 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.34■■□□□ 1.17
WNT3P56703 LINC00543-201ENST00000567234 1845 ntBASIC22.34■■□□□ 1.17
WNT3P56703 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.33■■□□□ 1.17
WNT3P56703 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.33■■□□□ 1.17
WNT3P56703 MIR6089-201ENST00000616698 64 ntBASIC22.33■■□□□ 1.17
WNT3P56703 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.33■■□□□ 1.17
WNT3P56703 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.33■■□□□ 1.16
WNT3P56703 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
WNT3P56703 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.33■■□□□ 1.16
WNT3P56703 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
WNT3P56703 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
WNT3P56703 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
WNT3P56703 AC026202.3-201ENST00000600805 1127 ntBASIC22.32■■□□□ 1.16
WNT3P56703 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
WNT3P56703 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
WNT3P56703 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
WNT3P56703 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
WNT3P56703 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.31■■□□□ 1.16
WNT3P56703 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.31■■□□□ 1.16
WNT3P56703 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.31■■□□□ 1.16
WNT3P56703 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT3P56703 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
WNT3P56703 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.3■■□□□ 1.16
WNT3P56703 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
WNT3P56703 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.3■■□□□ 1.16
WNT3P56703 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
WNT3P56703 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
WNT3P56703 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
WNT3P56703 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
WNT3P56703 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
WNT3P56703 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
WNT3P56703 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
WNT3P56703 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
WNT3P56703 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
WNT3P56703 AC012354.3-201ENST00000623734 483 ntBASIC22.28■■□□□ 1.16
WNT3P56703 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
WNT3P56703 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
WNT3P56703 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
WNT3P56703 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
WNT3P56703 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.28■■□□□ 1.16
WNT3P56703 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.28■■□□□ 1.16
WNT3P56703 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
WNT3P56703 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
WNT3P56703 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
WNT3P56703 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
WNT3P56703 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
WNT3P56703 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
WNT3P56703 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
WNT3P56703 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
WNT3P56703 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
WNT3P56703 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms