Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AP3S2-216ENST00000617003 1561 ntBASIC17.27■□□□□ 0.35
SHC3Q92529 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC3Q92529 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC3Q92529 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
SHC3Q92529 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC3Q92529 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC3Q92529 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SHC3Q92529 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SHC3Q92529 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 AC004461.1-201ENST00000412461 403 ntBASIC17.26■□□□□ 0.35
SHC3Q92529 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 UPF3AP3-201ENST00000420996 769 ntBASIC17.26■□□□□ 0.35
SHC3Q92529 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
SHC3Q92529 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.26■□□□□ 0.35
SHC3Q92529 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.26■□□□□ 0.35
SHC3Q92529 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.26■□□□□ 0.35
SHC3Q92529 AC243562.2-201ENST00000561247 970 ntBASIC17.26■□□□□ 0.35
SHC3Q92529 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC3Q92529 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 AC055717.3-201ENST00000622967 595 ntBASIC17.26■□□□□ 0.35
SHC3Q92529 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC3Q92529 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SHC3Q92529 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC3Q92529 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC3Q92529 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC3Q92529 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
SHC3Q92529 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC3Q92529 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SHC3Q92529 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHC3Q92529 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.25■□□□□ 0.35
SHC3Q92529 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.25■□□□□ 0.35
SHC3Q92529 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.25■□□□□ 0.35
SHC3Q92529 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.25■□□□□ 0.35
SHC3Q92529 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC3Q92529 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SHC3Q92529 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SHC3Q92529 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC3Q92529 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHC3Q92529 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SHC3Q92529 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 AL136982.4-201ENST00000437689 1740 ntBASIC17.24■□□□□ 0.35
SHC3Q92529 BNIP3P1-202ENST00000550043 1585 ntBASIC17.24■□□□□ 0.35
SHC3Q92529 PRAL-201ENST00000624952 3286 ntBASIC17.24■□□□□ 0.35
SHC3Q92529 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms