RNA–Protein interactions for RNA: ENST00000274773.11

TRIM7-201, Transcript of tripartite motif containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM7, Length 2,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7-201ENST00000274773 NISCHQ9Y2I1 1504 aa34.58■■■■□ 3.13
TRIM7-201ENST00000274773 CCDC180Q9P1Z9 1646 aa29.86■■■□□ 2.37
TRIM7-201ENST00000274773 ZCCHC6Q5VYS8 1495 aaKnown RBP29.21■■■□□ 2.27
TRIM7-201ENST00000274773 SHROOM4Q9ULL8 1493 aa28.98■■■□□ 2.23
TRIM7-201ENST00000274773 DCAF8L2P0C7V8 631 aa28.7■■■□□ 2.18
TRIM7-201ENST00000274773 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
TRIM7-201ENST00000274773 SUPT5HO00267 1087 aaKnown RBP28.21■■■□□ 2.11
TRIM7-201ENST00000274773 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
TRIM7-201ENST00000274773 ABCC9O60706 1549 aa27.7■■■□□ 2.02
TRIM7-201ENST00000274773 NACADO15069 1562 aa27.61■■■□□ 2.01
TRIM7-201ENST00000274773 SCRIBQ14160 1630 aa27.55■■■□□ 2
TRIM7-201ENST00000274773 HRCP23327 699 aa27.32■■□□□ 1.96
TRIM7-201ENST00000274773 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.95
TRIM7-201ENST00000274773 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
TRIM7-201ENST00000274773 RSF1Q96T23 1441 aaPredicted RBP27.1■■□□□ 1.93
TRIM7-201ENST00000274773 PPARGC1BQ86YN6 1023 aaKnown RBP26.98■■□□□ 1.91
TRIM7-201ENST00000274773 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
TRIM7-201ENST00000274773 CECR2Q9BXF3 1484 aa26.83■■□□□ 1.89
TRIM7-201ENST00000274773 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
TRIM7-201ENST00000274773 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
TRIM7-201ENST00000274773 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
TRIM7-201ENST00000274773 PCGF6Q9BYE7 350 aa26.62■■□□□ 1.85
TRIM7-201ENST00000274773 WIZO95785 1651 aa26.6■■□□□ 1.85
TRIM7-201ENST00000274773 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
TRIM7-201ENST00000274773 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
TRIM7-201ENST00000274773 PABPN1Q86U42 306 aaKnown RBP eCLIP26.4■■□□□ 1.82
TRIM7-201ENST00000274773 LOC105371045A0A1W2PR82 267 aa26.35■■□□□ 1.81
TRIM7-201ENST00000274773 TOP2AP11388 1531 aaKnown RBP26.32■■□□□ 1.8
TRIM7-201ENST00000274773 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
TRIM7-201ENST00000274773 SCAF1Q9H7N4 1312 aaKnown RBP26.26■■□□□ 1.79
TRIM7-201ENST00000274773 EIF4G1Q04637 1599 aaKnown RBP26.23■■□□□ 1.79
TRIM7-201ENST00000274773 SMARCA2P51531 1590 aa26.11■■□□□ 1.77
TRIM7-201ENST00000274773 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
TRIM7-201ENST00000274773 FAM9AQ8IZU1 332 aaPredicted RBP26.09■■□□□ 1.77
TRIM7-201ENST00000274773 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
TRIM7-201ENST00000274773 MYT1Q01538 1121 aa25.92■■□□□ 1.74
TRIM7-201ENST00000274773 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.74
TRIM7-201ENST00000274773 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
TRIM7-201ENST00000274773 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
TRIM7-201ENST00000274773 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
TRIM7-201ENST00000274773 TRIM26Q12899 539 aaPredicted RBP25.67■■□□□ 1.7
TRIM7-201ENST00000274773 HMGXB3Q12766 1538 aa25.52■■□□□ 1.68
TRIM7-201ENST00000274773 EEA1Q15075 1411 aa25.49■■□□□ 1.67
TRIM7-201ENST00000274773 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
TRIM7-201ENST00000274773 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
TRIM7-201ENST00000274773 SOGA1O94964 1423 aa25.43■■□□□ 1.66
TRIM7-201ENST00000274773 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
TRIM7-201ENST00000274773 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
TRIM7-201ENST00000274773 ACIN1Q9UKV3 1341 aaKnown RBP25.34■■□□□ 1.65
TRIM7-201ENST00000274773 RUSC2Q8N2Y8 1516 aa25.33■■□□□ 1.64
TRIM7-201ENST00000274773 ZEB1P37275 1124 aaPredicted RBP25.27■■□□□ 1.64
TRIM7-201ENST00000274773 CSRNP3Q8WYN3 585 aa25.26■■□□□ 1.63
TRIM7-201ENST00000274773 GTF3C3Q9Y5Q9 886 aa25.24■■□□□ 1.63
TRIM7-201ENST00000274773 TNIKQ9UKE5 1360 aa25.23■■□□□ 1.63
TRIM7-201ENST00000274773 TOP2BQ02880 1626 aa25.22■■□□□ 1.63
TRIM7-201ENST00000274773 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.63
TRIM7-201ENST00000274773 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
TRIM7-201ENST00000274773 KIF21BO75037 1637 aa25.16■■□□□ 1.62
TRIM7-201ENST00000274773 CEP162Q5TB80 1403 aa25.15■■□□□ 1.62
TRIM7-201ENST00000274773 UBTFP17480 764 aaKnown RBP25.15■■□□□ 1.62
TRIM7-201ENST00000274773 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
TRIM7-201ENST00000274773 CFTRP13569 1480 aa25.1■■□□□ 1.61
TRIM7-201ENST00000274773 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
TRIM7-201ENST00000274773 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
TRIM7-201ENST00000274773 CUX1P39880 1505 aa24.98■■□□□ 1.59
TRIM7-201ENST00000274773 TTBK1Q5TCY1 1321 aaPredicted RBP24.92■■□□□ 1.58
TRIM7-201ENST00000274773 RAPGEF2Q9Y4G8 1499 aa24.86■■□□□ 1.57
TRIM7-201ENST00000274773 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
TRIM7-201ENST00000274773 ERICH3Q5RHP9 1530 aa24.85■■□□□ 1.57
TRIM7-201ENST00000274773 CENPBP07199 599 aaPredicted RBP24.82■■□□□ 1.56
TRIM7-201ENST00000274773 PRXQ9BXM0 1461 aa24.8■■□□□ 1.56
TRIM7-201ENST00000274773 RANGAP1P46060 587 aaPredicted RBP24.8■■□□□ 1.56
TRIM7-201ENST00000274773 CLIP1P30622 1438 aa24.79■■□□□ 1.56
TRIM7-201ENST00000274773 KIF27Q86VH2 1401 aa24.76■■□□□ 1.55
TRIM7-201ENST00000274773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
TRIM7-201ENST00000274773 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
TRIM7-201ENST00000274773 DIEXFQ68CQ4 756 aaKnown RBP24.62■■□□□ 1.53
TRIM7-201ENST00000274773 CCER1Q8TC90 406 aaPredicted RBP24.6■■□□□ 1.53
TRIM7-201ENST00000274773 FANCD2Q9BXW9 1451 aa24.6■■□□□ 1.53
TRIM7-201ENST00000274773 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.53
TRIM7-201ENST00000274773 BCL11AQ9H165 835 aa24.56■■□□□ 1.52
TRIM7-201ENST00000274773 CUX2O14529 1486 aa24.55■■□□□ 1.52
TRIM7-201ENST00000274773 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
TRIM7-201ENST00000274773 NESP48681 1621 aa24.53■■□□□ 1.52
TRIM7-201ENST00000274773 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
TRIM7-201ENST00000274773 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
TRIM7-201ENST00000274773 APLP2Q06481 763 aa24.48■■□□□ 1.51
TRIM7-201ENST00000274773 IGF1RP08069 1367 aa24.47■■□□□ 1.51
TRIM7-201ENST00000274773 YTHDC1Q96MU7 727 aaKnown RBP24.45■■□□□ 1.5
TRIM7-201ENST00000274773 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
TRIM7-201ENST00000274773 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
TRIM7-201ENST00000274773 ABCA10Q8WWZ4 1543 aa24.38■■□□□ 1.49
TRIM7-201ENST00000274773 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
TRIM7-201ENST00000274773 CARMIL1Q5VZK9 1371 aa24.35■■□□□ 1.49
TRIM7-201ENST00000274773 ARHGAP35Q9NRY4 1499 aa24.34■■□□□ 1.49
TRIM7-201ENST00000274773 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
TRIM7-201ENST00000274773 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
TRIM7-201ENST00000274773 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
TRIM7-201ENST00000274773 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
TRIM7-201ENST00000274773 CUL7Q14999 1698 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms