RNA–Protein interactions for RNA: ENST00000614585.4

CPEB3-203, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CPEB3, Length 5,789 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-203ENST00000614585 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
CPEB3-203ENST00000614585 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
CPEB3-203ENST00000614585 PELP1Q8IZL8 1130 aaKnown RBP27.97■■■□□ 2.07
CPEB3-203ENST00000614585 EHMT2Q96KQ7 1210 aa27.43■■□□□ 1.98
CPEB3-203ENST00000614585 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.96
CPEB3-203ENST00000614585 APLP2Q06481 763 aa27.14■■□□□ 1.94
CPEB3-203ENST00000614585 ERICH6Q7L0X2 663 aa26.89■■□□□ 1.89
CPEB3-203ENST00000614585 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
CPEB3-203ENST00000614585 CCER1Q8TC90 406 aaPredicted RBP26.7■■□□□ 1.87
CPEB3-203ENST00000614585 FAM9AQ8IZU1 332 aaPredicted RBP26.65■■□□□ 1.86
CPEB3-203ENST00000614585 CENPBP07199 599 aaPredicted RBP26.62■■□□□ 1.85
CPEB3-203ENST00000614585 TTBK1Q5TCY1 1321 aaPredicted RBP26.59■■□□□ 1.85
CPEB3-203ENST00000614585 PCGF6Q9BYE7 350 aa26.51■■□□□ 1.83
CPEB3-203ENST00000614585 ZEB1P37275 1124 aaPredicted RBP26.37■■□□□ 1.81
CPEB3-203ENST00000614585 RANGAP1P46060 587 aaPredicted RBP26.16■■□□□ 1.78
CPEB3-203ENST00000614585 MYT1Q01538 1121 aa26.15■■□□□ 1.78
CPEB3-203ENST00000614585 NEFLP07196 543 aa26.15■■□□□ 1.78
CPEB3-203ENST00000614585 ATP1B4Q9UN42 357 aaPredicted RBP26.04■■□□□ 1.76
CPEB3-203ENST00000614585 YTHDC1Q96MU7 727 aaKnown RBP25.95■■□□□ 1.75
CPEB3-203ENST00000614585 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
CPEB3-203ENST00000614585 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
CPEB3-203ENST00000614585 DAXXQ9UER7 740 aaPredicted RBP25.59■■□□□ 1.69
CPEB3-203ENST00000614585 PPARGC1BQ86YN6 1023 aaKnown RBP25.35■■□□□ 1.65
CPEB3-203ENST00000614585 TRIM26Q12899 539 aaPredicted RBP25.28■■□□□ 1.64
CPEB3-203ENST00000614585 POLR3GLQ9BT43 218 aa25.25■■□□□ 1.63
CPEB3-203ENST00000614585 MYT1LQ9UL68 1186 aa25.12■■□□□ 1.61
CPEB3-203ENST00000614585 HRCP23327 699 aa25.11■■□□□ 1.61
CPEB3-203ENST00000614585 ITGAEP38570 1179 aa25.09■■□□□ 1.61
CPEB3-203ENST00000614585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
CPEB3-203ENST00000614585 HNRNPUL2Q1KMD3 747 aaKnown RBP25■■□□□ 1.59
CPEB3-203ENST00000614585 ZNF316A6NFI3 1004 aaPredicted RBP24.99■■□□□ 1.59
CPEB3-203ENST00000614585 RTL5Q5HYW3 569 aaPredicted RBP24.99■■□□□ 1.59
CPEB3-203ENST00000614585 CNGB1Q14028 1251 aaPredicted RBP24.95■■□□□ 1.58
CPEB3-203ENST00000614585 CLSPNQ9HAW4 1339 aa24.85■■□□□ 1.57
CPEB3-203ENST00000614585 SLC4A1APQ9BWU0 796 aaKnown RBP24.81■■□□□ 1.56
CPEB3-203ENST00000614585 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
CPEB3-203ENST00000614585 DIEXFQ68CQ4 756 aaKnown RBP24.63■■□□□ 1.53
CPEB3-203ENST00000614585 LOC105371045A0A1W2PR82 267 aa24.61■■□□□ 1.53
CPEB3-203ENST00000614585 FAM50AQ14320 339 aaKnown RBP24.4■■□□□ 1.5
CPEB3-203ENST00000614585 BCANQ96GW7 911 aa24.4■■□□□ 1.5
CPEB3-203ENST00000614585 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
CPEB3-203ENST00000614585 CDK11AQ9UQ88 783 aaPredicted RBP24.36■■□□□ 1.49
CPEB3-203ENST00000614585 ZBTB47Q9UFB7 747 aaPredicted RBP24.36■■□□□ 1.49
CPEB3-203ENST00000614585 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
CPEB3-203ENST00000614585 ANP32CO43423 234 aa24.27■■□□□ 1.48
CPEB3-203ENST00000614585 GTF3C3Q9Y5Q9 886 aa24.25■■□□□ 1.47
CPEB3-203ENST00000614585 CANXP27824 592 aaKnown RBP24.16■■□□□ 1.46
CPEB3-203ENST00000614585 ZNF326Q5BKZ1 582 aaKnown RBP24.14■■□□□ 1.45
CPEB3-203ENST00000614585 BCL11AQ9H165 835 aa24.03■■□□□ 1.44
CPEB3-203ENST00000614585 SLC24A1O60721 1099 aa24.02■■□□□ 1.44
CPEB3-203ENST00000614585 ANP32AP39687 249 aaKnown RBP24.01■■□□□ 1.43
CPEB3-203ENST00000614585 NEFMP07197 916 aa23.96■■□□□ 1.43
CPEB3-203ENST00000614585 NPM2Q86SE8 214 aaKnown RBP23.86■■□□□ 1.41
CPEB3-203ENST00000614585 ANP32BQ92688 251 aaKnown RBP23.82■■□□□ 1.4
CPEB3-203ENST00000614585 ACIN1Q9UKV3 1341 aaKnown RBP23.79■■□□□ 1.4
CPEB3-203ENST00000614585 EIF5BO60841 1220 aaKnown RBP23.73■■□□□ 1.39
CPEB3-203ENST00000614585 HSP90AA1P07900 732 aaKnown RBP23.67■■□□□ 1.38
CPEB3-203ENST00000614585 FBLN2P98095 1184 aa23.62■■□□□ 1.37
CPEB3-203ENST00000614585 UPF2Q9HAU5 1272 aaKnown RBP23.6■■□□□ 1.37
CPEB3-203ENST00000614585 FKBP8Q14318 412 aa23.59■■□□□ 1.37
CPEB3-203ENST00000614585 GLIPR1L2Q4G1C9 344 aa23.57■■□□□ 1.36
CPEB3-203ENST00000614585 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
CPEB3-203ENST00000614585 ARID3CA6NKF2 412 aa23.49■■□□□ 1.35
CPEB3-203ENST00000614585 ZNF777Q9ULD5 760 aaPredicted RBP23.48■■□□□ 1.35
CPEB3-203ENST00000614585 P3H3Q8IVL6 736 aa23.48■■□□□ 1.35
CPEB3-203ENST00000614585 HNRNPUQ00839 825 aaKnown RBP eCLIP23.42■■□□□ 1.34
CPEB3-203ENST00000614585 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
CPEB3-203ENST00000614585 FAM9BQ8IZU0 186 aa23.37■■□□□ 1.33
CPEB3-203ENST00000614585 NBR1Q14596 966 aa23.34■■□□□ 1.33
CPEB3-203ENST00000614585 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.32■■□□□ 1.32
CPEB3-203ENST00000614585 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
CPEB3-203ENST00000614585 CCDC136Q96JN2 1154 aa23.3■■□□□ 1.32
CPEB3-203ENST00000614585 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
CPEB3-203ENST00000614585 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
CPEB3-203ENST00000614585 STAG3Q9UJ98 1225 aa23.28■■□□□ 1.32
CPEB3-203ENST00000614585 ARXQ96QS3 562 aa23.27■■□□□ 1.32
CPEB3-203ENST00000614585 ABCC9O60706 1549 aa23.27■■□□□ 1.32
CPEB3-203ENST00000614585 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
CPEB3-203ENST00000614585 DDX10Q13206 875 aaKnown RBP23.24■■□□□ 1.31
CPEB3-203ENST00000614585 TMC1Q8TDI8 760 aa23.2■■□□□ 1.3
CPEB3-203ENST00000614585 WDR43Q15061 677 aaKnown RBP eCLIP23.19■■□□□ 1.3
CPEB3-203ENST00000614585 CDK11BP21127 795 aaKnown RBP23.13■■□□□ 1.29
CPEB3-203ENST00000614585 MYH16Q9H6N6 1097 aa23.1■■□□□ 1.29
CPEB3-203ENST00000614585 MRS2Q9HD23 443 aa23.06■■□□□ 1.28
CPEB3-203ENST00000614585 PLPPR3Q6T4P5 718 aa23.05■■□□□ 1.28
CPEB3-203ENST00000614585 DDRGK1Q96HY6 314 aa23.04■■□□□ 1.28
CPEB3-203ENST00000614585 NCLP19338 710 aaKnown RBP23.01■■□□□ 1.27
CPEB3-203ENST00000614585 BECN1Q14457 450 aa23.01■■□□□ 1.27
CPEB3-203ENST00000614585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.27
CPEB3-203ENST00000614585 IRX6P78412 446 aaPredicted RBP22.99■■□□□ 1.27
CPEB3-203ENST00000614585 TRIM44Q96DX7 344 aaPredicted RBP22.98■■□□□ 1.27
CPEB3-203ENST00000614585 CHIC2Q9UKJ5 165 aa22.97■■□□□ 1.27
CPEB3-203ENST00000614585 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
CPEB3-203ENST00000614585 ANP32EQ9BTT0 268 aa22.93■■□□□ 1.26
CPEB3-203ENST00000614585 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
CPEB3-203ENST00000614585 GOLGA6L22H0YM25 854 aa22.91■■□□□ 1.26
CPEB3-203ENST00000614585 NPM1P06748 294 aaKnown RBP eCLIP22.91■■□□□ 1.26
CPEB3-203ENST00000614585 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
CPEB3-203ENST00000614585 TNNT2P45379 298 aaPredicted RBP22.84■■□□□ 1.25
CPEB3-203ENST00000614585 MIER1Q8N108 512 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms