Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 RBM17P1-201ENST00000453646 1190 ntBASIC8.84□□□□□ -0.99
LCA10Q71F78 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC8.84□□□□□ -0.99
LCA10Q71F78 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC8.84□□□□□ -0.99
LCA10Q71F78 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC8.84□□□□□ -0.99
LCA10Q71F78 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 REEP1-209ENST00000541910 969 ntTSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 ETFA-216ENST00000560726 942 ntTSL 3 BASIC8.84□□□□□ -0.99
LCA10Q71F78 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC8.84□□□□□ -0.99
LCA10Q71F78 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
LCA10Q71F78 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
LCA10Q71F78 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC8.84□□□□□ -0.99
LCA10Q71F78 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC8.84□□□□□ -0.99
LCA10Q71F78 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC8.84□□□□□ -0.99
LCA10Q71F78 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 AC232323.1-201ENST00000540724 2099 ntBASIC8.84□□□□□ -0.99
LCA10Q71F78 REXO1L5P-201ENST00000622260 2098 ntBASIC8.84□□□□□ -0.99
LCA10Q71F78 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LCA10Q71F78 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
LCA10Q71F78 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
LCA10Q71F78 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC8.84□□□□□ -1
LCA10Q71F78 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC8.83□□□□□ -1
LCA10Q71F78 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC8.83□□□□□ -1
LCA10Q71F78 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC8.83□□□□□ -1
LCA10Q71F78 MME-217ENST00000616757 1315 ntTSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
LCA10Q71F78 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
LCA10Q71F78 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC8.83□□□□□ -1
LCA10Q71F78 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC8.83□□□□□ -1
LCA10Q71F78 AL390955.1-201ENST00000428694 934 ntBASIC8.83□□□□□ -1
LCA10Q71F78 GCSHP5-201ENST00000443090 522 ntBASIC8.83□□□□□ -1
LCA10Q71F78 GXYLT1P6-201ENST00000456472 1187 ntBASIC8.83□□□□□ -1
LCA10Q71F78 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC8.83□□□□□ -1
LCA10Q71F78 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC8.83□□□□□ -1
LCA10Q71F78 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC8.83□□□□□ -1
LCA10Q71F78 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC8.83□□□□□ -1
LCA10Q71F78 C2orf69P3-201ENST00000565542 1120 ntBASIC8.83□□□□□ -1
LCA10Q71F78 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC8.83□□□□□ -1
LCA10Q71F78 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC8.83□□□□□ -1
LCA10Q71F78 AP000525.1-201ENST00000608286 694 ntBASIC8.83□□□□□ -1
LCA10Q71F78 AC024243.1-201ENST00000609234 778 ntBASIC8.83□□□□□ -1
LCA10Q71F78 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC8.83□□□□□ -1
LCA10Q71F78 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC8.83□□□□□ -1
LCA10Q71F78 AC116407.2-201ENST00000613639 860 ntBASIC8.83□□□□□ -1
LCA10Q71F78 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC8.83□□□□□ -1
LCA10Q71F78 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms