RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 PELP1Q8IZL8 1130 aaKnown RBP20.69■□□□□ 0.9
HLCS-207ENST00000612277 MYT1Q01538 1121 aa19.93■□□□□ 0.78
HLCS-207ENST00000612277 ERICH6Q7L0X2 663 aa19.92■□□□□ 0.78
HLCS-207ENST00000612277 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
HLCS-207ENST00000612277 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
HLCS-207ENST00000612277 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
HLCS-207ENST00000612277 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
HLCS-207ENST00000612277 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
HLCS-207ENST00000612277 APLP2Q06481 763 aa19.02■□□□□ 0.64
HLCS-207ENST00000612277 NEFLP07196 543 aa18.98■□□□□ 0.63
HLCS-207ENST00000612277 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
HLCS-207ENST00000612277 TTBK1Q5TCY1 1321 aaPredicted RBP18.86■□□□□ 0.61
HLCS-207ENST00000612277 ZEB1P37275 1124 aaPredicted RBP18.84■□□□□ 0.61
HLCS-207ENST00000612277 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
HLCS-207ENST00000612277 DAXXQ9UER7 740 aaPredicted RBP18.73■□□□□ 0.59
HLCS-207ENST00000612277 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
HLCS-207ENST00000612277 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
HLCS-207ENST00000612277 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
HLCS-207ENST00000612277 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
HLCS-207ENST00000612277 NISCHQ9Y2I1 1504 aa18.12■□□□□ 0.49
HLCS-207ENST00000612277 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
HLCS-207ENST00000612277 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
HLCS-207ENST00000612277 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
HLCS-207ENST00000612277 HRCP23327 699 aa17.87■□□□□ 0.45
HLCS-207ENST00000612277 GLIPR1L2Q4G1C9 344 aa17.84■□□□□ 0.45
HLCS-207ENST00000612277 POLR3GLQ9BT43 218 aa17.81■□□□□ 0.44
HLCS-207ENST00000612277 EIF5BO60841 1220 aaKnown RBP17.76■□□□□ 0.43
HLCS-207ENST00000612277 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
HLCS-207ENST00000612277 UBTFP17480 764 aaKnown RBP17.73■□□□□ 0.43
HLCS-207ENST00000612277 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
HLCS-207ENST00000612277 CDK11AQ9UQ88 783 aaPredicted RBP17.64■□□□□ 0.42
HLCS-207ENST00000612277 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
HLCS-207ENST00000612277 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
HLCS-207ENST00000612277 BCANQ96GW7 911 aa17.54■□□□□ 0.4
HLCS-207ENST00000612277 DIEXFQ68CQ4 756 aaKnown RBP17.52■□□□□ 0.4
HLCS-207ENST00000612277 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
HLCS-207ENST00000612277 ANP32BQ92688 251 aaKnown RBP17.48■□□□□ 0.39
HLCS-207ENST00000612277 ZBTB47Q9UFB7 747 aaPredicted RBP17.47■□□□□ 0.39
HLCS-207ENST00000612277 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
HLCS-207ENST00000612277 ANP32AP39687 249 aaKnown RBP17.44■□□□□ 0.38
HLCS-207ENST00000612277 ITGAEP38570 1179 aa17.41■□□□□ 0.38
HLCS-207ENST00000612277 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
HLCS-207ENST00000612277 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
HLCS-207ENST00000612277 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
HLCS-207ENST00000612277 CANXP27824 592 aaKnown RBP17.22■□□□□ 0.35
HLCS-207ENST00000612277 ANP32CO43423 234 aa17.18■□□□□ 0.34
HLCS-207ENST00000612277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
HLCS-207ENST00000612277 BCL11AQ9H165 835 aa17.13■□□□□ 0.33
HLCS-207ENST00000612277 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
HLCS-207ENST00000612277 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
HLCS-207ENST00000612277 ACIN1Q9UKV3 1341 aaKnown RBP17.1■□□□□ 0.33
HLCS-207ENST00000612277 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
HLCS-207ENST00000612277 NBR1Q14596 966 aa17.02■□□□□ 0.31
HLCS-207ENST00000612277 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
HLCS-207ENST00000612277 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
HLCS-207ENST00000612277 ARXQ96QS3 562 aa16.94■□□□□ 0.3
HLCS-207ENST00000612277 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
HLCS-207ENST00000612277 NEFMP07197 916 aa16.92■□□□□ 0.3
HLCS-207ENST00000612277 TRIM52Q96A61 297 aa16.89■□□□□ 0.3
HLCS-207ENST00000612277 CDK11BP21127 795 aaKnown RBP16.89■□□□□ 0.29
HLCS-207ENST00000612277 FKBP8Q14318 412 aa16.88■□□□□ 0.29
HLCS-207ENST00000612277 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
HLCS-207ENST00000612277 TRIM44Q96DX7 344 aaPredicted RBP16.84■□□□□ 0.29
HLCS-207ENST00000612277 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.29
HLCS-207ENST00000612277 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
HLCS-207ENST00000612277 ANP32EQ9BTT0 268 aa16.72■□□□□ 0.27
HLCS-207ENST00000612277 NAP1L5Q96NT1 182 aaPredicted RBP16.7■□□□□ 0.26
HLCS-207ENST00000612277 ERICH6BQ5W0A0 696 aa16.68■□□□□ 0.26
HLCS-207ENST00000612277 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
HLCS-207ENST00000612277 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
HLCS-207ENST00000612277 CCDC136Q96JN2 1154 aa16.65■□□□□ 0.26
HLCS-207ENST00000612277 DNTTIP2Q5QJE6 756 aaKnown RBP16.65■□□□□ 0.26
HLCS-207ENST00000612277 PTMAP06454 111 aaKnown RBP16.63■□□□□ 0.25
HLCS-207ENST00000612277 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
HLCS-207ENST00000612277 BECN1Q14457 450 aa16.6■□□□□ 0.25
HLCS-207ENST00000612277 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
HLCS-207ENST00000612277 GOLGA6L22H0YM25 854 aa16.59■□□□□ 0.25
HLCS-207ENST00000612277 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
HLCS-207ENST00000612277 RTN4Q9NQC3 1192 aaKnown RBP16.54■□□□□ 0.24
HLCS-207ENST00000612277 ZRSR1Q15695 479 aaKnown RBP16.48■□□□□ 0.23
HLCS-207ENST00000612277 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
HLCS-207ENST00000612277 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
HLCS-207ENST00000612277 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
HLCS-207ENST00000612277 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
HLCS-207ENST00000612277 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
HLCS-207ENST00000612277 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
HLCS-207ENST00000612277 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
HLCS-207ENST00000612277 TNNT3P45378 269 aaPredicted RBP16.33■□□□□ 0.2
HLCS-207ENST00000612277 IRX6P78412 446 aaPredicted RBP16.32■□□□□ 0.2
HLCS-207ENST00000612277 NRDCO43847 1150 aa16.3■□□□□ 0.2
HLCS-207ENST00000612277 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
HLCS-207ENST00000612277 WDR43Q15061 677 aaKnown RBP eCLIP16.3■□□□□ 0.2
HLCS-207ENST00000612277 PLCB2Q00722 1185 aa16.29■□□□□ 0.2
HLCS-207ENST00000612277 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
HLCS-207ENST00000612277 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
HLCS-207ENST00000612277 TPRNQ4KMQ1 711 aa16.27■□□□□ 0.19
HLCS-207ENST00000612277 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
HLCS-207ENST00000612277 NOP58Q9Y2X3 529 aaKnown RBP16.26■□□□□ 0.19
HLCS-207ENST00000612277 L1TD1Q5T7N2 865 aaKnown RBP16.25■□□□□ 0.19
HLCS-207ENST00000612277 TONSLQ96HA7 1378 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms